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KIAA2013 (KIAA2013)

Identity

Alias_symbol (synonym)MGC33867
RP5-1077B9.1
Other alias-
HGNC (Hugo) KIAA2013
LocusID (NCBI) 90231
Atlas_Id 54410
Location 1p36.22  [Link to chromosome band 1p36]
Location_base_pair Starts at 11979645 and ends at 11986485 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
KIAA2013 (1p36.22) / CNTNAP2 (7q35)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA2013   28513
Cards
Entrez_Gene (NCBI)KIAA2013  90231  KIAA2013
Aliases
GeneCards (Weizmann)KIAA2013
Ensembl hg19 (Hinxton)ENSG00000116685 [Gene_View]  chr1:11979645-11986485 [Contig_View]  KIAA2013 [Vega]
Ensembl hg38 (Hinxton)ENSG00000116685 [Gene_View]  chr1:11979645-11986485 [Contig_View]  KIAA2013 [Vega]
ICGC DataPortalENSG00000116685
TCGA cBioPortalKIAA2013
AceView (NCBI)KIAA2013
Genatlas (Paris)KIAA2013
WikiGenes90231
SOURCE (Princeton)KIAA2013
Genetics Home Reference (NIH)KIAA2013
Genomic and cartography
GoldenPath hg19 (UCSC)KIAA2013  -     chr1:11979645-11986485 -  1p36.22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIAA2013  -     1p36.22   [Description]    (hg38-Dec_2013)
EnsemblKIAA2013 - 1p36.22 [CytoView hg19]  KIAA2013 - 1p36.22 [CytoView hg38]
Mapping of homologs : NCBIKIAA2013 [Mapview hg19]  KIAA2013 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB095933 AL833697 AL833891 BC004501 BC035033
RefSeq transcript (Entrez)NM_138346
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929289
Consensus coding sequences : CCDS (NCBI)KIAA2013
Cluster EST : UnigeneHs.520094 [ NCBI ]
CGAP (NCI)Hs.520094
Alternative Splicing GalleryENSG00000116685
Gene ExpressionKIAA2013 [ NCBI-GEO ]   KIAA2013 [ EBI - ARRAY_EXPRESS ]   KIAA2013 [ SEEK ]   KIAA2013 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA2013 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90231
GTEX Portal (Tissue expression)KIAA2013
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IYS2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IYS2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IYS2
Splice isoforms : SwissVarQ8IYS2
PhosPhoSitePlusQ8IYS2
Domains : Interpro (EBI)DUF2152   
Domain families : Pfam (Sanger)DUF2152 (PF10222)   
Domain families : Pfam (NCBI)pfam10222   
Conserved Domain (NCBI)KIAA2013
DMDM Disease mutations90231
Blocks (Seattle)KIAA2013
SuperfamilyQ8IYS2
Human Protein AtlasENSG00000116685
Peptide AtlasQ8IYS2
HPRD14576
IPIIPI00217853   IPI00217007   IPI00896553   
Protein Interaction databases
DIP (DOE-UCLA)Q8IYS2
IntAct (EBI)Q8IYS2
FunCoupENSG00000116685
BioGRIDKIAA2013
STRING (EMBL)KIAA2013
ZODIACKIAA2013
Ontologies - Pathways
QuickGOQ8IYS2
Ontology : AmiGOmembrane  integral component of membrane  
Ontology : EGO-EBImembrane  integral component of membrane  
NDEx NetworkKIAA2013
Atlas of Cancer Signalling NetworkKIAA2013
Wikipedia pathwaysKIAA2013
Orthology - Evolution
OrthoDB90231
GeneTree (enSembl)ENSG00000116685
Phylogenetic Trees/Animal Genes : TreeFamKIAA2013
HOVERGENQ8IYS2
HOGENOMQ8IYS2
Homologs : HomoloGeneKIAA2013
Homology/Alignments : Family Browser (UCSC)KIAA2013
Gene fusions - Rearrangements
Fusion : MitelmanKIAA2013/CNTNAP2 [1p36.22/7q35]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA2013 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA2013
dbVarKIAA2013
ClinVarKIAA2013
1000_GenomesKIAA2013 
Exome Variant ServerKIAA2013
ExAC (Exome Aggregation Consortium)KIAA2013 (select the gene name)
Genetic variants : HAPMAP90231
Genomic Variants (DGV)KIAA2013 [DGVbeta]
DECIPHER (Syndromes)1:11979645-11986485  ENSG00000116685
CONAN: Copy Number AnalysisKIAA2013 
Mutations
ICGC Data PortalKIAA2013 
TCGA Data PortalKIAA2013 
Broad Tumor PortalKIAA2013
OASIS PortalKIAA2013 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA2013  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA2013
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA2013
DgiDB (Drug Gene Interaction Database)KIAA2013
DoCM (Curated mutations)KIAA2013 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA2013 (select a term)
intoGenKIAA2013
Cancer3DKIAA2013(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA2013
Genetic Testing Registry KIAA2013
NextProtQ8IYS2 [Medical]
TSGene90231
GENETestsKIAA2013
Huge Navigator KIAA2013 [HugePedia]
snp3D : Map Gene to Disease90231
BioCentury BCIQKIAA2013
ClinGenKIAA2013
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90231
Chemical/Pharm GKB GenePA142671593
Clinical trialKIAA2013
Miscellaneous
canSAR (ICR)KIAA2013 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA2013
EVEXKIAA2013
GoPubMedKIAA2013
iHOPKIAA2013
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:11:50 CET 2017

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