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KIAA2018 (KIAA2018)

Identity

Other alias-
HGNC (Hugo) KIAA2018
LocusID (NCBI) 205717
Atlas_Id 64908
Location 3q13.2  [Link to chromosome band 3q13]
Location_base_pair Starts at 113367233 and ends at 113415493 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA2018   30494
Cards
Entrez_Gene (NCBI)KIAA2018  205717  KIAA2018
Aliases
GeneCards (Weizmann)KIAA2018
Ensembl hg19 (Hinxton)ENSG00000176542 [Gene_View]  chr3:113367233-113415493 [Contig_View]  KIAA2018 [Vega]
Ensembl hg38 (Hinxton)ENSG00000176542 [Gene_View]  chr3:113367233-113415493 [Contig_View]  KIAA2018 [Vega]
ICGC DataPortalENSG00000176542
TCGA cBioPortalKIAA2018
AceView (NCBI)KIAA2018
Genatlas (Paris)KIAA2018
WikiGenes205717
SOURCE (Princeton)KIAA2018
Genetics Home Reference (NIH)KIAA2018
Genomic and cartography
GoldenPath hg19 (UCSC)KIAA2018  -     chr3:113367233-113415493 -  3q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIAA2018  -     3q13.2   [Description]    (hg38-Dec_2013)
EnsemblKIAA2018 - 3q13.2 [CytoView hg19]  KIAA2018 - 3q13.2 [CytoView hg38]
Mapping of homologs : NCBIKIAA2018 [Mapview hg19]  KIAA2018 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB095938 BC043383 BX537728 CR749439
RefSeq transcript (Entrez)NM_001009899
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)KIAA2018
Cluster EST : UnigeneHs.632570 [ NCBI ]
CGAP (NCI)Hs.632570
Alternative Splicing GalleryENSG00000176542
Gene ExpressionKIAA2018 [ NCBI-GEO ]   KIAA2018 [ EBI - ARRAY_EXPRESS ]   KIAA2018 [ SEEK ]   KIAA2018 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA2018 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)205717
GTEX Portal (Tissue expression)KIAA2018
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ68DE3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ68DE3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ68DE3
Splice isoforms : SwissVarQ68DE3
PhosPhoSitePlusQ68DE3
Domaine pattern : Prosite (Expaxy)BHLH (PS50888)   
Domains : Interpro (EBI)bHLH_dom    Glyco_hydro_47   
Domain families : Pfam (Sanger)HLH (PF00010)   
Domain families : Pfam (NCBI)pfam00010   
Domain families : Smart (EMBL)HLH (SM00353)  
Conserved Domain (NCBI)KIAA2018
DMDM Disease mutations205717
Blocks (Seattle)KIAA2018
SuperfamilyQ68DE3
Human Protein AtlasENSG00000176542
Peptide AtlasQ68DE3
HPRD13912
IPIIPI00217002   IPI00829891   
Protein Interaction databases
DIP (DOE-UCLA)Q68DE3
IntAct (EBI)Q68DE3
FunCoupENSG00000176542
BioGRIDKIAA2018
STRING (EMBL)KIAA2018
ZODIACKIAA2018
Ontologies - Pathways
QuickGOQ68DE3
Ontology : AmiGODNA binding  mannosyl-oligosaccharide 1,2-alpha-mannosidase activity  calcium ion binding  nucleus  metabolic process  membrane  protein dimerization activity  
Ontology : EGO-EBIDNA binding  mannosyl-oligosaccharide 1,2-alpha-mannosidase activity  calcium ion binding  nucleus  metabolic process  membrane  protein dimerization activity  
NDEx NetworkKIAA2018
Atlas of Cancer Signalling NetworkKIAA2018
Wikipedia pathwaysKIAA2018
Orthology - Evolution
OrthoDB205717
GeneTree (enSembl)ENSG00000176542
Phylogenetic Trees/Animal Genes : TreeFamKIAA2018
HOVERGENQ68DE3
HOGENOMQ68DE3
Homologs : HomoloGeneKIAA2018
Homology/Alignments : Family Browser (UCSC)KIAA2018
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA2018 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA2018
dbVarKIAA2018
ClinVarKIAA2018
1000_GenomesKIAA2018 
Exome Variant ServerKIAA2018
ExAC (Exome Aggregation Consortium)KIAA2018 (select the gene name)
Genetic variants : HAPMAP205717
Genomic Variants (DGV)KIAA2018 [DGVbeta]
DECIPHER (Syndromes)3:113367233-113415493  ENSG00000176542
CONAN: Copy Number AnalysisKIAA2018 
Mutations
ICGC Data PortalKIAA2018 
TCGA Data PortalKIAA2018 
Broad Tumor PortalKIAA2018
OASIS PortalKIAA2018 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA2018  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA2018
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA2018
DgiDB (Drug Gene Interaction Database)KIAA2018
DoCM (Curated mutations)KIAA2018 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA2018 (select a term)
intoGenKIAA2018
Cancer3DKIAA2018(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA2018
Genetic Testing Registry KIAA2018
NextProtQ68DE3 [Medical]
TSGene205717
GENETestsKIAA2018
Huge Navigator KIAA2018 [HugePedia]
snp3D : Map Gene to Disease205717
BioCentury BCIQKIAA2018
ClinGenKIAA2018
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD205717
Chemical/Pharm GKB GenePA142671594
Clinical trialKIAA2018
Miscellaneous
canSAR (ICR)KIAA2018 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA2018
EVEXKIAA2018
GoPubMedKIAA2018
iHOPKIAA2018
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:09:51 CET 2017

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