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KIF18B (kinesin family member 18B)

Identity

Other alias-
HGNC (Hugo) KIF18B
LocusID (NCBI) 146909
Atlas_Id 54411
Location 17q21.31  [Link to chromosome band 17q21]
Location_base_pair Starts at 44924711 and ends at 44947711 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
EFTUD2 (17q21.31) / KIF18B (17q21.31)KIF18B (17q21.31) / CALR (19p13.2)MED26 (19p13.11) / KIF18B (17q21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIF18B   27102
Cards
Entrez_Gene (NCBI)KIF18B  146909  kinesin family member 18B
Aliases
GeneCards (Weizmann)KIF18B
Ensembl hg19 (Hinxton)ENSG00000186185 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186185 [Gene_View]  chr17:44924711-44947711 [Contig_View]  KIF18B [Vega]
ICGC DataPortalENSG00000186185
TCGA cBioPortalKIF18B
AceView (NCBI)KIF18B
Genatlas (Paris)KIF18B
WikiGenes146909
SOURCE (Princeton)KIF18B
Genetics Home Reference (NIH)KIF18B
Genomic and cartography
GoldenPath hg38 (UCSC)KIF18B  -     chr17:44924711-44947711 -  17q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIF18B  -     17q21.31   [Description]    (hg19-Feb_2009)
EnsemblKIF18B - 17q21.31 [CytoView hg19]  KIF18B - 17q21.31 [CytoView hg38]
Mapping of homologs : NCBIKIF18B [Mapview hg19]  KIF18B [Mapview hg38]
OMIM614570   
Gene and transcription
Genbank (Entrez)BC044933 BC048263 BC067365 BC136590 BC144271
RefSeq transcript (Entrez)NM_001080443 NM_001264573 NM_001265577
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIF18B
Cluster EST : UnigeneHs.135094 [ NCBI ]
CGAP (NCI)Hs.135094
Alternative Splicing GalleryENSG00000186185
Gene ExpressionKIF18B [ NCBI-GEO ]   KIF18B [ EBI - ARRAY_EXPRESS ]   KIF18B [ SEEK ]   KIF18B [ MEM ]
Gene Expression Viewer (FireBrowse)KIF18B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)146909
GTEX Portal (Tissue expression)KIF18B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86Y91   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86Y91  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86Y91
Splice isoforms : SwissVarQ86Y91
PhosPhoSitePlusQ86Y91
Domaine pattern : Prosite (Expaxy)KINESIN_MOTOR_1 (PS00411)    KINESIN_MOTOR_2 (PS50067)   
Domains : Interpro (EBI)Kinesin_motor_CS    Kinesin_motor_dom    P-loop_NTPase   
Domain families : Pfam (Sanger)Kinesin (PF00225)   
Domain families : Pfam (NCBI)pfam00225   
Domain families : Smart (EMBL)KISc (SM00129)  
Conserved Domain (NCBI)KIF18B
DMDM Disease mutations146909
Blocks (Seattle)KIF18B
SuperfamilyQ86Y91
Human Protein AtlasENSG00000186185
Peptide AtlasQ86Y91
IPIIPI00894475   IPI00943232   IPI00983277   IPI00979511   
Protein Interaction databases
DIP (DOE-UCLA)Q86Y91
IntAct (EBI)Q86Y91
FunCoupENSG00000186185
BioGRIDKIF18B
STRING (EMBL)KIF18B
ZODIACKIF18B
Ontologies - Pathways
QuickGOQ86Y91
Ontology : AmiGOmitotic sister chromatid segregation  astral microtubule  mitotic cell cycle  motor activity  microtubule motor activity  protein binding  ATP binding  nucleus  cytoplasm  cytosol  kinesin complex  microtubule-based movement  microtubule depolymerization  microtubule binding  nuclear body  ATPase activity  kinesin binding  microtubule plus-end  cell division  regulation of cell division  microtubule end  
Ontology : EGO-EBImitotic sister chromatid segregation  astral microtubule  mitotic cell cycle  motor activity  microtubule motor activity  protein binding  ATP binding  nucleus  cytoplasm  cytosol  kinesin complex  microtubule-based movement  microtubule depolymerization  microtubule binding  nuclear body  ATPase activity  kinesin binding  microtubule plus-end  cell division  regulation of cell division  microtubule end  
NDEx NetworkKIF18B
Atlas of Cancer Signalling NetworkKIF18B
Wikipedia pathwaysKIF18B
Orthology - Evolution
OrthoDB146909
GeneTree (enSembl)ENSG00000186185
Phylogenetic Trees/Animal Genes : TreeFamKIF18B
HOVERGENQ86Y91
HOGENOMQ86Y91
Homologs : HomoloGeneKIF18B
Homology/Alignments : Family Browser (UCSC)KIF18B
Gene fusions - Rearrangements
Fusion : MitelmanEFTUD2/KIF18B [17q21.31/17q21.31]  [del(17)(q21q21)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIF18B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIF18B
dbVarKIF18B
ClinVarKIF18B
1000_GenomesKIF18B 
Exome Variant ServerKIF18B
ExAC (Exome Aggregation Consortium)KIF18B (select the gene name)
Genetic variants : HAPMAP146909
Genomic Variants (DGV)KIF18B [DGVbeta]
DECIPHERKIF18B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIF18B 
Mutations
ICGC Data PortalKIF18B 
TCGA Data PortalKIF18B 
Broad Tumor PortalKIF18B
OASIS PortalKIF18B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIF18B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIF18B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIF18B
DgiDB (Drug Gene Interaction Database)KIF18B
DoCM (Curated mutations)KIF18B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIF18B (select a term)
intoGenKIF18B
Cancer3DKIF18B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614570   
Orphanet
MedgenKIF18B
Genetic Testing Registry KIF18B
NextProtQ86Y91 [Medical]
TSGene146909
GENETestsKIF18B
Target ValidationKIF18B
Huge Navigator KIF18B [HugePedia]
snp3D : Map Gene to Disease146909
BioCentury BCIQKIF18B
ClinGenKIF18B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD146909
Chemical/Pharm GKB GenePA162393284
Clinical trialKIF18B
Miscellaneous
canSAR (ICR)KIF18B (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIF18B
EVEXKIF18B
GoPubMedKIF18B
iHOPKIF18B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:14:26 CEST 2017

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