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KIF1BP (KIF1 binding protein)

Identity

Alias_namesKIAA1279
KIAA1279
Alias_symbol (synonym)DKFZP586B0923
TTC20
KBP
Other alias
HGNC (Hugo) KIF1BP
LocusID (NCBI) 26128
Atlas_Id 64880
Location 10q22.1  [Link to chromosome band 10q22]
Location_base_pair Starts at 70748477 and ends at 70776739 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
VPS26A (10q22.1) / KIF1BP (10q22.1)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)KIF1BP   23419
Cards
Entrez_Gene (NCBI)KIF1BP  26128  KIF1 binding protein
AliasesKBP; KIAA1279; TTC20
GeneCards (Weizmann)KIF1BP
Ensembl hg19 (Hinxton)ENSG00000198954 [Gene_View]  chr10:70748477-70776739 [Contig_View]  KIF1BP [Vega]
Ensembl hg38 (Hinxton)ENSG00000198954 [Gene_View]  chr10:70748477-70776739 [Contig_View]  KIF1BP [Vega]
ICGC DataPortalENSG00000198954
TCGA cBioPortalKIF1BP
AceView (NCBI)KIF1BP
Genatlas (Paris)KIF1BP
WikiGenes26128
SOURCE (Princeton)KIF1BP
Genetics Home Reference (NIH)KIF1BP
Genomic and cartography
GoldenPath hg19 (UCSC)KIF1BP  -     chr10:70748477-70776739 +  10q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIF1BP  -     10q22.1   [Description]    (hg38-Dec_2013)
EnsemblKIF1BP - 10q22.1 [CytoView hg19]  KIF1BP - 10q22.1 [CytoView hg38]
Mapping of homologs : NCBIKIF1BP [Mapview hg19]  KIF1BP [Mapview hg38]
OMIM609367   609460   
Gene and transcription
Genbank (Entrez)AA913814 AB033105 AI491993 AK291343 AL050190
RefSeq transcript (Entrez)NM_015634
RefSeq genomic (Entrez)NC_000010 NC_018921 NG_017061 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)KIF1BP
Cluster EST : UnigeneHs.279580 [ NCBI ]
CGAP (NCI)Hs.279580
Alternative Splicing GalleryENSG00000198954
Gene ExpressionKIF1BP [ NCBI-GEO ]   KIF1BP [ EBI - ARRAY_EXPRESS ]   KIF1BP [ SEEK ]   KIF1BP [ MEM ]
Gene Expression Viewer (FireBrowse)KIF1BP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26128
GTEX Portal (Tissue expression)KIF1BP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96EK5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96EK5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96EK5
Splice isoforms : SwissVarQ96EK5
PhosPhoSitePlusQ96EK5
Domains : Interpro (EBI)KBP    TPR-like_helical_dom   
Domain families : Pfam (Sanger)KBP_C (PF12309)   
Domain families : Pfam (NCBI)pfam12309   
Conserved Domain (NCBI)KIF1BP
DMDM Disease mutations26128
Blocks (Seattle)KIF1BP
SuperfamilyQ96EK5
Human Protein AtlasENSG00000198954
Peptide AtlasQ96EK5
HPRD13848
IPIIPI00477355   
Protein Interaction databases
DIP (DOE-UCLA)Q96EK5
IntAct (EBI)Q96EK5
FunCoupENSG00000198954
BioGRIDKIF1BP
STRING (EMBL)KIF1BP
ZODIACKIF1BP
Ontologies - Pathways
QuickGOQ96EK5
Ontology : AmiGOprotein binding  mitochondrion  cytoskeleton  mitochondrial transport  nervous system development  kinesin binding  cell differentiation  
Ontology : EGO-EBIprotein binding  mitochondrion  cytoskeleton  mitochondrial transport  nervous system development  kinesin binding  cell differentiation  
NDEx NetworkKIF1BP
Atlas of Cancer Signalling NetworkKIF1BP
Wikipedia pathwaysKIF1BP
Orthology - Evolution
OrthoDB26128
GeneTree (enSembl)ENSG00000198954
Phylogenetic Trees/Animal Genes : TreeFamKIF1BP
HOVERGENQ96EK5
HOGENOMQ96EK5
Homologs : HomoloGeneKIF1BP
Homology/Alignments : Family Browser (UCSC)KIF1BP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIF1BP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIF1BP
dbVarKIF1BP
ClinVarKIF1BP
1000_GenomesKIF1BP 
Exome Variant ServerKIF1BP
ExAC (Exome Aggregation Consortium)KIF1BP (select the gene name)
Genetic variants : HAPMAP26128
Genomic Variants (DGV)KIF1BP [DGVbeta]
DECIPHER (Syndromes)10:70748477-70776739  ENSG00000198954
CONAN: Copy Number AnalysisKIF1BP 
Mutations
ICGC Data PortalKIF1BP 
TCGA Data PortalKIF1BP 
Broad Tumor PortalKIF1BP
OASIS PortalKIF1BP [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDKIF1BP
BioMutasearch KIF1BP
DgiDB (Drug Gene Interaction Database)KIF1BP
DoCM (Curated mutations)KIF1BP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIF1BP (select a term)
intoGenKIF1BP
Cancer3DKIF1BP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609367    609460   
Orphanet10887   
MedgenKIF1BP
Genetic Testing Registry KIF1BP
NextProtQ96EK5 [Medical]
TSGene26128
GENETestsKIF1BP
Huge Navigator KIF1BP [HugePedia]
snp3D : Map Gene to Disease26128
BioCentury BCIQKIF1BP
ClinGenKIF1BP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26128
Chemical/Pharm GKB GenePA134897614
Clinical trialKIF1BP
Miscellaneous
canSAR (ICR)KIF1BP (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIF1BP
EVEXKIF1BP
GoPubMedKIF1BP
iHOPKIF1BP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:09:52 CET 2017

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