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KIF20A (kinesin family member 20A)

Identity

Alias_namesRAB6KIFL
RAB6 interacting
Other aliasMKLP2
HGNC (Hugo) KIF20A
LocusID (NCBI) 10112
Atlas_Id 45523
Location 5q31.2  [Link to chromosome band 5q31]
Location_base_pair Starts at 137514417 and ends at 137523404 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
KIF20A (5q31.2) / C3orf62 (3p21.31)KIF20A (5q31.2) / CDC23 (5q31.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIF20A   9787
Cards
Entrez_Gene (NCBI)KIF20A  10112  kinesin family member 20A
AliasesMKLP2; RAB6KIFL
GeneCards (Weizmann)KIF20A
Ensembl hg19 (Hinxton)ENSG00000112984 [Gene_View]  chr5:137514417-137523404 [Contig_View]  KIF20A [Vega]
Ensembl hg38 (Hinxton)ENSG00000112984 [Gene_View]  chr5:137514417-137523404 [Contig_View]  KIF20A [Vega]
ICGC DataPortalENSG00000112984
TCGA cBioPortalKIF20A
AceView (NCBI)KIF20A
Genatlas (Paris)KIF20A
WikiGenes10112
SOURCE (Princeton)KIF20A
Genetics Home Reference (NIH)KIF20A
Genomic and cartography
GoldenPath hg19 (UCSC)KIF20A  -     chr5:137514417-137523404 +  5q31.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIF20A  -     5q31.2   [Description]    (hg38-Dec_2013)
EnsemblKIF20A - 5q31.2 [CytoView hg19]  KIF20A - 5q31.2 [CytoView hg38]
Mapping of homologs : NCBIKIF20A [Mapview hg19]  KIF20A [Mapview hg38]
OMIM605664   
Gene and transcription
Genbank (Entrez)AF070672 AF153329 AK024804 AK025790 AK296879
RefSeq transcript (Entrez)NM_005733
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929323
Consensus coding sequences : CCDS (NCBI)KIF20A
Cluster EST : UnigeneHs.718626 [ NCBI ]
CGAP (NCI)Hs.718626
Alternative Splicing GalleryENSG00000112984
Gene ExpressionKIF20A [ NCBI-GEO ]   KIF20A [ EBI - ARRAY_EXPRESS ]   KIF20A [ SEEK ]   KIF20A [ MEM ]
Gene Expression Viewer (FireBrowse)KIF20A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10112
GTEX Portal (Tissue expression)KIF20A
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95235   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95235  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95235
Splice isoforms : SwissVarO95235
PhosPhoSitePlusO95235
Domaine pattern : Prosite (Expaxy)KINESIN_MOTOR_1 (PS00411)    KINESIN_MOTOR_2 (PS50067)   
Domains : Interpro (EBI)KIF20A    Kinesin-like_fam    Kinesin_motor_CS    Kinesin_motor_dom    P-loop_NTPase   
Domain families : Pfam (Sanger)Kinesin (PF00225)   
Domain families : Pfam (NCBI)pfam00225   
Domain families : Smart (EMBL)KISc (SM00129)  
Conserved Domain (NCBI)KIF20A
DMDM Disease mutations10112
Blocks (Seattle)KIF20A
SuperfamilyO95235
Human Protein AtlasENSG00000112984
Peptide AtlasO95235
HPRD09292
IPIIPI00029422   IPI00968120   IPI00966200   IPI00966446   IPI00965092   
Protein Interaction databases
DIP (DOE-UCLA)O95235
IntAct (EBI)O95235
FunCoupENSG00000112984
BioGRIDKIF20A
STRING (EMBL)KIF20A
ZODIACKIF20A
Ontologies - Pathways
QuickGOO95235
Ontology : AmiGOmitotic cytokinesis  cytokinesis  cell separation after cytokinesis  microtubule bundle formation  microtubule motor activity  transporter activity  protein binding  ATP binding  nucleoplasm  Golgi apparatus  spindle  kinesin complex  microtubule  microtubule-based movement  microtubule binding  metabolic process  protein transport  vesicle-mediated transport  ATPase activity  protein kinase binding  midbody  
Ontology : EGO-EBImitotic cytokinesis  cytokinesis  cell separation after cytokinesis  microtubule bundle formation  microtubule motor activity  transporter activity  protein binding  ATP binding  nucleoplasm  Golgi apparatus  spindle  kinesin complex  microtubule  microtubule-based movement  microtubule binding  metabolic process  protein transport  vesicle-mediated transport  ATPase activity  protein kinase binding  midbody  
NDEx NetworkKIF20A
Atlas of Cancer Signalling NetworkKIF20A
Wikipedia pathwaysKIF20A
Orthology - Evolution
OrthoDB10112
GeneTree (enSembl)ENSG00000112984
Phylogenetic Trees/Animal Genes : TreeFamKIF20A
HOVERGENO95235
HOGENOMO95235
Homologs : HomoloGeneKIF20A
Homology/Alignments : Family Browser (UCSC)KIF20A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIF20A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIF20A
dbVarKIF20A
ClinVarKIF20A
1000_GenomesKIF20A 
Exome Variant ServerKIF20A
ExAC (Exome Aggregation Consortium)KIF20A (select the gene name)
Genetic variants : HAPMAP10112
Genomic Variants (DGV)KIF20A [DGVbeta]
DECIPHER (Syndromes)5:137514417-137523404  ENSG00000112984
CONAN: Copy Number AnalysisKIF20A 
Mutations
ICGC Data PortalKIF20A 
TCGA Data PortalKIF20A 
Broad Tumor PortalKIF20A
OASIS PortalKIF20A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIF20A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIF20A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIF20A
DgiDB (Drug Gene Interaction Database)KIF20A
DoCM (Curated mutations)KIF20A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIF20A (select a term)
intoGenKIF20A
Cancer3DKIF20A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605664   
Orphanet
MedgenKIF20A
Genetic Testing Registry KIF20A
NextProtO95235 [Medical]
TSGene10112
GENETestsKIF20A
Huge Navigator KIF20A [HugePedia]
snp3D : Map Gene to Disease10112
BioCentury BCIQKIF20A
ClinGenKIF20A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10112
Chemical/Pharm GKB GenePA34149
Clinical trialKIF20A
Miscellaneous
canSAR (ICR)KIF20A (select the gene name)
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIF20A
EVEXKIF20A
GoPubMedKIF20A
iHOPKIF20A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:11:52 CET 2017

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