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KIF24 (kinesin family member 24)

Identity

Alias_namesC9orf48
chromosome 9 open reading frame 48
Alias_symbol (synonym)bA571F15.4
FLJ10933
FLJ43884
Other alias
HGNC (Hugo) KIF24
LocusID (NCBI) 347240
Atlas_Id 54412
Location 9p13.3  [Link to chromosome band 9p13]
Location_base_pair Starts at 34252378 and ends at 34329198 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
KIF24 (9p13.3) / FAAH (1p33)KIF24 (9p13.3) / GNE (9p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Lung: Translocations in Squamous Cell Carcinoma


External links

Nomenclature
HGNC (Hugo)KIF24   19916
Cards
Entrez_Gene (NCBI)KIF24  347240  kinesin family member 24
AliasesC9orf48; bA571F15.4
GeneCards (Weizmann)KIF24
Ensembl hg19 (Hinxton)ENSG00000186638 [Gene_View]  chr9:34252378-34329198 [Contig_View]  KIF24 [Vega]
Ensembl hg38 (Hinxton)ENSG00000186638 [Gene_View]  chr9:34252378-34329198 [Contig_View]  KIF24 [Vega]
ICGC DataPortalENSG00000186638
TCGA cBioPortalKIF24
AceView (NCBI)KIF24
Genatlas (Paris)KIF24
WikiGenes347240
SOURCE (Princeton)KIF24
Genetics Home Reference (NIH)KIF24
Genomic and cartography
GoldenPath hg19 (UCSC)KIF24  -     chr9:34252378-34329198 -  9p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIF24  -     9p13.3   [Description]    (hg38-Dec_2013)
EnsemblKIF24 - 9p13.3 [CytoView hg19]  KIF24 - 9p13.3 [CytoView hg38]
Mapping of homologs : NCBIKIF24 [Mapview hg19]  KIF24 [Mapview hg38]
OMIM613747   
Gene and transcription
Genbank (Entrez)AK001795 AK125180 AK125872 AK310014 BC048311
RefSeq transcript (Entrez)NM_194313
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008413 NW_004929342
Consensus coding sequences : CCDS (NCBI)KIF24
Cluster EST : UnigeneHs.710246 [ NCBI ]
CGAP (NCI)Hs.710246
Alternative Splicing GalleryENSG00000186638
Gene ExpressionKIF24 [ NCBI-GEO ]   KIF24 [ EBI - ARRAY_EXPRESS ]   KIF24 [ SEEK ]   KIF24 [ MEM ]
Gene Expression Viewer (FireBrowse)KIF24 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)347240
GTEX Portal (Tissue expression)KIF24
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5T7B8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5T7B8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5T7B8
Splice isoforms : SwissVarQ5T7B8
PhosPhoSitePlusQ5T7B8
Domaine pattern : Prosite (Expaxy)KINESIN_MOTOR_1 (PS00411)    KINESIN_MOTOR_2 (PS50067)    SAM_DOMAIN (PS50105)   
Domains : Interpro (EBI)Kinesin-like_fam    Kinesin_motor_CS    Kinesin_motor_dom    P-loop_NTPase    SAM    SAM/pointed   
Domain families : Pfam (Sanger)Kinesin (PF00225)    SAM_1 (PF00536)   
Domain families : Pfam (NCBI)pfam00225    pfam00536   
Domain families : Smart (EMBL)KISc (SM00129)  
Conserved Domain (NCBI)KIF24
DMDM Disease mutations347240
Blocks (Seattle)KIF24
SuperfamilyQ5T7B8
Human Protein AtlasENSG00000186638
Peptide AtlasQ5T7B8
HPRD12963
IPIIPI00828028   IPI00419014   IPI00847428   IPI00828144   IPI00514603   
Protein Interaction databases
DIP (DOE-UCLA)Q5T7B8
IntAct (EBI)Q5T7B8
FunCoupENSG00000186638
BioGRIDKIF24
STRING (EMBL)KIF24
ZODIACKIF24
Ontologies - Pathways
QuickGOQ5T7B8
Ontology : AmiGOmicrotubule motor activity  protein binding  ATP binding  centriole  cytosol  kinesin complex  microtubule  microtubule-based movement  microtubule depolymerization  microtubule binding  metabolic process  ATPase activity  cilium assembly  protein complex  
Ontology : EGO-EBImicrotubule motor activity  protein binding  ATP binding  centriole  cytosol  kinesin complex  microtubule  microtubule-based movement  microtubule depolymerization  microtubule binding  metabolic process  ATPase activity  cilium assembly  protein complex  
NDEx NetworkKIF24
Atlas of Cancer Signalling NetworkKIF24
Wikipedia pathwaysKIF24
Orthology - Evolution
OrthoDB347240
GeneTree (enSembl)ENSG00000186638
Phylogenetic Trees/Animal Genes : TreeFamKIF24
HOVERGENQ5T7B8
HOGENOMQ5T7B8
Homologs : HomoloGeneKIF24
Homology/Alignments : Family Browser (UCSC)KIF24
Gene fusions - Rearrangements
Fusion : MitelmanKIF24/FAAH [9p13.3/1p33]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIF24 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIF24
dbVarKIF24
ClinVarKIF24
1000_GenomesKIF24 
Exome Variant ServerKIF24
ExAC (Exome Aggregation Consortium)KIF24 (select the gene name)
Genetic variants : HAPMAP347240
Genomic Variants (DGV)KIF24 [DGVbeta]
DECIPHER (Syndromes)9:34252378-34329198  ENSG00000186638
CONAN: Copy Number AnalysisKIF24 
Mutations
ICGC Data PortalKIF24 
TCGA Data PortalKIF24 
Broad Tumor PortalKIF24
OASIS PortalKIF24 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIF24  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIF24
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIF24
DgiDB (Drug Gene Interaction Database)KIF24
DoCM (Curated mutations)KIF24 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIF24 (select a term)
intoGenKIF24
Cancer3DKIF24(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613747   
Orphanet
MedgenKIF24
Genetic Testing Registry KIF24
NextProtQ5T7B8 [Medical]
TSGene347240
GENETestsKIF24
Huge Navigator KIF24 [HugePedia]
snp3D : Map Gene to Disease347240
BioCentury BCIQKIF24
ClinGenKIF24
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD347240
Chemical/Pharm GKB GenePA142671589
Clinical trialKIF24
Miscellaneous
canSAR (ICR)KIF24 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIF24
EVEXKIF24
GoPubMedKIF24
iHOPKIF24
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:11:53 CET 2017

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