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KIF27 (kinesin family member 27)

Identity

Alias_symbol (synonym)DKFZp434D0917
Other alias-
HGNC (Hugo) KIF27
LocusID (NCBI) 55582
Atlas_Id 64923
Location 9q21.32  [Link to chromosome band 9q21]
Location_base_pair Starts at 83836699 and ends at 83921465 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GKAP1 (9q21.32) / KIF27 (9q21.32)TMPRSS12 (12q13.12) / KIF27 (9q21.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIF27   18632
Cards
Entrez_Gene (NCBI)KIF27  55582  kinesin family member 27
Aliases
GeneCards (Weizmann)KIF27
Ensembl hg19 (Hinxton)ENSG00000165115 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165115 [Gene_View]  chr9:83836699-83921465 [Contig_View]  KIF27 [Vega]
ICGC DataPortalENSG00000165115
TCGA cBioPortalKIF27
AceView (NCBI)KIF27
Genatlas (Paris)KIF27
WikiGenes55582
SOURCE (Princeton)KIF27
Genetics Home Reference (NIH)KIF27
Genomic and cartography
GoldenPath hg38 (UCSC)KIF27  -     chr9:83836699-83921465 -  9q21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIF27  -     9q21.32   [Description]    (hg19-Feb_2009)
EnsemblKIF27 - 9q21.32 [CytoView hg19]  KIF27 - 9q21.32 [CytoView hg38]
Mapping of homologs : NCBIKIF27 [Mapview hg19]  KIF27 [Mapview hg38]
OMIM611253   
Gene and transcription
Genbank (Entrez)AK297689 AL133654 AY237536 AY237537 AY237538
RefSeq transcript (Entrez)NM_001271927 NM_001271928 NM_017576
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIF27
Cluster EST : UnigeneHs.697514 [ NCBI ]
CGAP (NCI)Hs.697514
Alternative Splicing GalleryENSG00000165115
Gene ExpressionKIF27 [ NCBI-GEO ]   KIF27 [ EBI - ARRAY_EXPRESS ]   KIF27 [ SEEK ]   KIF27 [ MEM ]
Gene Expression Viewer (FireBrowse)KIF27 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55582
GTEX Portal (Tissue expression)KIF27
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86VH2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86VH2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86VH2
Splice isoforms : SwissVarQ86VH2
PhosPhoSitePlusQ86VH2
Domaine pattern : Prosite (Expaxy)KINESIN_MOTOR_1 (PS00411)    KINESIN_MOTOR_2 (PS50067)   
Domains : Interpro (EBI)Kinesin_motor_CS    Kinesin_motor_dom    P-loop_NTPase   
Domain families : Pfam (Sanger)Kinesin (PF00225)   
Domain families : Pfam (NCBI)pfam00225   
Domain families : Smart (EMBL)KISc (SM00129)  
Conserved Domain (NCBI)KIF27
DMDM Disease mutations55582
Blocks (Seattle)KIF27
SuperfamilyQ86VH2
Human Protein AtlasENSG00000165115
Peptide AtlasQ86VH2
HPRD11179
IPIIPI00294749   IPI00869120   IPI00384317   IPI00869282   
Protein Interaction databases
DIP (DOE-UCLA)Q86VH2
IntAct (EBI)Q86VH2
FunCoupENSG00000165115
BioGRIDKIF27
STRING (EMBL)KIF27
ZODIACKIF27
Ontologies - Pathways
QuickGOQ86VH2
Ontology : AmiGOepithelial cilium movement  ATP binding  cytoplasm  kinesin complex  microtubule  cilium  microtubule-based movement  microtubule binding  ATP-dependent microtubule motor activity, plus-end-directed  ventricular system development  cilium assembly  extracellular exosome  
Ontology : EGO-EBIepithelial cilium movement  ATP binding  cytoplasm  kinesin complex  microtubule  cilium  microtubule-based movement  microtubule binding  ATP-dependent microtubule motor activity, plus-end-directed  ventricular system development  cilium assembly  extracellular exosome  
NDEx NetworkKIF27
Atlas of Cancer Signalling NetworkKIF27
Wikipedia pathwaysKIF27
Orthology - Evolution
OrthoDB55582
GeneTree (enSembl)ENSG00000165115
Phylogenetic Trees/Animal Genes : TreeFamKIF27
HOVERGENQ86VH2
HOGENOMQ86VH2
Homologs : HomoloGeneKIF27
Homology/Alignments : Family Browser (UCSC)KIF27
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIF27 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIF27
dbVarKIF27
ClinVarKIF27
1000_GenomesKIF27 
Exome Variant ServerKIF27
ExAC (Exome Aggregation Consortium)KIF27 (select the gene name)
Genetic variants : HAPMAP55582
Genomic Variants (DGV)KIF27 [DGVbeta]
DECIPHERKIF27 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIF27 
Mutations
ICGC Data PortalKIF27 
TCGA Data PortalKIF27 
Broad Tumor PortalKIF27
OASIS PortalKIF27 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIF27  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIF27
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIF27
DgiDB (Drug Gene Interaction Database)KIF27
DoCM (Curated mutations)KIF27 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIF27 (select a term)
intoGenKIF27
Cancer3DKIF27(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611253   
Orphanet
MedgenKIF27
Genetic Testing Registry KIF27
NextProtQ86VH2 [Medical]
TSGene55582
GENETestsKIF27
Target ValidationKIF27
Huge Navigator KIF27 [HugePedia]
snp3D : Map Gene to Disease55582
BioCentury BCIQKIF27
ClinGenKIF27
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55582
Chemical/Pharm GKB GenePA134912901
Clinical trialKIF27
Miscellaneous
canSAR (ICR)KIF27 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIF27
EVEXKIF27
GoPubMedKIF27
iHOPKIF27
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:54:38 CEST 2017

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