Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KIF4B (kinesin family member 4B)

Identity

Other alias-
HGNC (Hugo) KIF4B
LocusID (NCBI) 285643
Atlas_Id 64927
Location 5q33.2  [Link to chromosome band 5q33]
Location_base_pair Starts at 155013755 and ends at 155018132 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIF4B   6322
Cards
Entrez_Gene (NCBI)KIF4B  285643  kinesin family member 4B
Aliases
GeneCards (Weizmann)KIF4B
Ensembl hg19 (Hinxton)ENSG00000226650 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226650 [Gene_View]  chr5:155013755-155018132 [Contig_View]  KIF4B [Vega]
ICGC DataPortalENSG00000226650
TCGA cBioPortalKIF4B
AceView (NCBI)KIF4B
Genatlas (Paris)KIF4B
WikiGenes285643
SOURCE (Princeton)KIF4B
Genetics Home Reference (NIH)KIF4B
Genomic and cartography
GoldenPath hg38 (UCSC)KIF4B  -     chr5:155013755-155018132 +  5q33.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIF4B  -     5q33.2   [Description]    (hg19-Feb_2009)
EnsemblKIF4B - 5q33.2 [CytoView hg19]  KIF4B - 5q33.2 [CytoView hg38]
Mapping of homologs : NCBIKIF4B [Mapview hg19]  KIF4B [Mapview hg38]
OMIM609184   
Gene and transcription
Genbank (Entrez)AK302388 BC167779
RefSeq transcript (Entrez)NM_001099293
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIF4B
Cluster EST : UnigeneHs.567824 [ NCBI ]
CGAP (NCI)Hs.567824
Alternative Splicing GalleryENSG00000226650
Gene ExpressionKIF4B [ NCBI-GEO ]   KIF4B [ EBI - ARRAY_EXPRESS ]   KIF4B [ SEEK ]   KIF4B [ MEM ]
Gene Expression Viewer (FireBrowse)KIF4B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285643
GTEX Portal (Tissue expression)KIF4B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2VIQ3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2VIQ3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2VIQ3
Splice isoforms : SwissVarQ2VIQ3
PhosPhoSitePlusQ2VIQ3
Domaine pattern : Prosite (Expaxy)KINESIN_MOTOR_1 (PS00411)    KINESIN_MOTOR_2 (PS50067)   
Domains : Interpro (EBI)Kinesin_motor_CS    Kinesin_motor_dom    P-loop_NTPase    Tesmin/TSO1-like_CXC   
Domain families : Pfam (Sanger)Kinesin (PF00225)   
Domain families : Pfam (NCBI)pfam00225   
Domain families : Smart (EMBL)CXC (SM01114)  KISc (SM00129)  
Conserved Domain (NCBI)KIF4B
DMDM Disease mutations285643
Blocks (Seattle)KIF4B
SuperfamilyQ2VIQ3
Human Protein AtlasENSG00000226650
Peptide AtlasQ2VIQ3
IPIIPI00175193   
Protein Interaction databases
DIP (DOE-UCLA)Q2VIQ3
IntAct (EBI)Q2VIQ3
FunCoupENSG00000226650
BioGRIDKIF4B
STRING (EMBL)KIF4B
ZODIACKIF4B
Ontologies - Pathways
QuickGOQ2VIQ3
Ontology : AmiGOmitotic cytokinesis  DNA binding  ATP binding  nucleoplasm  cytosol  kinesin complex  microtubule  retrograde vesicle-mediated transport, Golgi to ER  microtubule-based movement  microtubule-based movement  microtubule binding  ATP-dependent microtubule motor activity, plus-end-directed  nuclear matrix  antigen processing and presentation of exogenous peptide antigen via MHC class II  intercellular bridge  mitotic spindle midzone assembly  
Ontology : EGO-EBImitotic cytokinesis  DNA binding  ATP binding  nucleoplasm  cytosol  kinesin complex  microtubule  retrograde vesicle-mediated transport, Golgi to ER  microtubule-based movement  microtubule-based movement  microtubule binding  ATP-dependent microtubule motor activity, plus-end-directed  nuclear matrix  antigen processing and presentation of exogenous peptide antigen via MHC class II  intercellular bridge  mitotic spindle midzone assembly  
NDEx NetworkKIF4B
Atlas of Cancer Signalling NetworkKIF4B
Wikipedia pathwaysKIF4B
Orthology - Evolution
OrthoDB285643
GeneTree (enSembl)ENSG00000226650
Phylogenetic Trees/Animal Genes : TreeFamKIF4B
HOVERGENQ2VIQ3
HOGENOMQ2VIQ3
Homologs : HomoloGeneKIF4B
Homology/Alignments : Family Browser (UCSC)KIF4B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIF4B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIF4B
dbVarKIF4B
ClinVarKIF4B
1000_GenomesKIF4B 
Exome Variant ServerKIF4B
ExAC (Exome Aggregation Consortium)KIF4B (select the gene name)
Genetic variants : HAPMAP285643
Genomic Variants (DGV)KIF4B [DGVbeta]
DECIPHERKIF4B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIF4B 
Mutations
ICGC Data PortalKIF4B 
TCGA Data PortalKIF4B 
Broad Tumor PortalKIF4B
OASIS PortalKIF4B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIF4B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIF4B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIF4B
DgiDB (Drug Gene Interaction Database)KIF4B
DoCM (Curated mutations)KIF4B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIF4B (select a term)
intoGenKIF4B
Cancer3DKIF4B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609184   
Orphanet
MedgenKIF4B
Genetic Testing Registry KIF4B
NextProtQ2VIQ3 [Medical]
TSGene285643
GENETestsKIF4B
Target ValidationKIF4B
Huge Navigator KIF4B [HugePedia]
snp3D : Map Gene to Disease285643
BioCentury BCIQKIF4B
ClinGenKIF4B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285643
Chemical/Pharm GKB GenePA30106
Clinical trialKIF4B
Miscellaneous
canSAR (ICR)KIF4B (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIF4B
EVEXKIF4B
GoPubMedKIF4B
iHOPKIF4B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:11:56 CEST 2017

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