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KIF9 (kinesin family member 9)

Identity

Alias_symbol (synonym)MGC104186
Other alias-
HGNC (Hugo) KIF9
LocusID (NCBI) 64147
Atlas_Id 64930
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 47228026 and ends at 47282847 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KIF9 (3p21.31) / KIF9 (3p21.31)SETD2 (3p21.31) / KIF9 (3p21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIF9   16666
Cards
Entrez_Gene (NCBI)KIF9  64147  kinesin family member 9
Aliases
GeneCards (Weizmann)KIF9
Ensembl hg19 (Hinxton)ENSG00000088727 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000088727 [Gene_View]  chr3:47228026-47282847 [Contig_View]  KIF9 [Vega]
ICGC DataPortalENSG00000088727
TCGA cBioPortalKIF9
AceView (NCBI)KIF9
Genatlas (Paris)KIF9
WikiGenes64147
SOURCE (Princeton)KIF9
Genetics Home Reference (NIH)KIF9
Genomic and cartography
GoldenPath hg38 (UCSC)KIF9  -     chr3:47228026-47282847 -  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIF9  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblKIF9 - 3p21.31 [CytoView hg19]  KIF9 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBIKIF9 [Mapview hg19]  KIF9 [Mapview hg38]
OMIM607910   
Gene and transcription
Genbank (Entrez)AF311212 AI741745 AK023894 AK292547 AK302070
RefSeq transcript (Entrez)NM_001134878 NM_022342 NM_182902 NM_182903
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIF9
Cluster EST : UnigeneHs.373947 [ NCBI ]
CGAP (NCI)Hs.373947
Alternative Splicing GalleryENSG00000088727
Gene ExpressionKIF9 [ NCBI-GEO ]   KIF9 [ EBI - ARRAY_EXPRESS ]   KIF9 [ SEEK ]   KIF9 [ MEM ]
Gene Expression Viewer (FireBrowse)KIF9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64147
GTEX Portal (Tissue expression)KIF9
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HAQ2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HAQ2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HAQ2
Splice isoforms : SwissVarQ9HAQ2
PhosPhoSitePlusQ9HAQ2
Domaine pattern : Prosite (Expaxy)KINESIN_MOTOR_1 (PS00411)    KINESIN_MOTOR_2 (PS50067)   
Domains : Interpro (EBI)Kinesin_motor_CS    Kinesin_motor_dom    P-loop_NTPase   
Domain families : Pfam (Sanger)Kinesin (PF00225)   
Domain families : Pfam (NCBI)pfam00225   
Domain families : Smart (EMBL)KISc (SM00129)  
Conserved Domain (NCBI)KIF9
DMDM Disease mutations64147
Blocks (Seattle)KIF9
PDB (SRS)3NWN   
PDB (PDBSum)3NWN   
PDB (IMB)3NWN   
PDB (RSDB)3NWN   
Structural Biology KnowledgeBase3NWN   
SCOP (Structural Classification of Proteins)3NWN   
CATH (Classification of proteins structures)3NWN   
SuperfamilyQ9HAQ2
Human Protein AtlasENSG00000088727
Peptide AtlasQ9HAQ2
HPRD07444
IPIIPI00029437   IPI00066670   IPI00909501   IPI00798354   IPI00925246   IPI00796996   IPI00924860   
Protein Interaction databases
DIP (DOE-UCLA)Q9HAQ2
IntAct (EBI)Q9HAQ2
FunCoupENSG00000088727
BioGRIDKIF9
STRING (EMBL)KIF9
ZODIACKIF9
Ontologies - Pathways
QuickGOQ9HAQ2
Ontology : AmiGOpodosome  microtubule motor activity  protein binding  ATP binding  cytoplasm  kinesin complex  microtubule  microtubule-based movement  microtubule binding  ATPase activity  extracellular matrix disassembly  vesicle  protein dimerization activity  regulation of podosome assembly  organelle disassembly  
Ontology : EGO-EBIpodosome  microtubule motor activity  protein binding  ATP binding  cytoplasm  kinesin complex  microtubule  microtubule-based movement  microtubule binding  ATPase activity  extracellular matrix disassembly  vesicle  protein dimerization activity  regulation of podosome assembly  organelle disassembly  
NDEx NetworkKIF9
Atlas of Cancer Signalling NetworkKIF9
Wikipedia pathwaysKIF9
Orthology - Evolution
OrthoDB64147
GeneTree (enSembl)ENSG00000088727
Phylogenetic Trees/Animal Genes : TreeFamKIF9
HOVERGENQ9HAQ2
HOGENOMQ9HAQ2
Homologs : HomoloGeneKIF9
Homology/Alignments : Family Browser (UCSC)KIF9
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIF9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIF9
dbVarKIF9
ClinVarKIF9
1000_GenomesKIF9 
Exome Variant ServerKIF9
ExAC (Exome Aggregation Consortium)KIF9 (select the gene name)
Genetic variants : HAPMAP64147
Genomic Variants (DGV)KIF9 [DGVbeta]
DECIPHERKIF9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIF9 
Mutations
ICGC Data PortalKIF9 
TCGA Data PortalKIF9 
Broad Tumor PortalKIF9
OASIS PortalKIF9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIF9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIF9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIF9
DgiDB (Drug Gene Interaction Database)KIF9
DoCM (Curated mutations)KIF9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIF9 (select a term)
intoGenKIF9
Cancer3DKIF9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607910   
Orphanet
MedgenKIF9
Genetic Testing Registry KIF9
NextProtQ9HAQ2 [Medical]
TSGene64147
GENETestsKIF9
Target ValidationKIF9
Huge Navigator KIF9 [HugePedia]
snp3D : Map Gene to Disease64147
BioCentury BCIQKIF9
ClinGenKIF9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64147
Chemical/Pharm GKB GenePA30110
Clinical trialKIF9
Miscellaneous
canSAR (ICR)KIF9 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIF9
EVEXKIF9
GoPubMedKIF9
iHOPKIF9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:11:57 CEST 2017

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