Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

KIFC2 (kinesin family member C2)

Identity

Other alias-
HGNC (Hugo) KIFC2
LocusID (NCBI) 90990
Atlas_Id 64933
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 144466337 and ends at 144474116 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KIFC2 (8q24.3) / POMP (13q12.3)KIFC2 (8q24.3) / SYNE1 (6q25.1)NPRL3 (16p13.3) / KIFC2 (8q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIFC2   29530
Cards
Entrez_Gene (NCBI)KIFC2  90990  kinesin family member C2
Aliases
GeneCards (Weizmann)KIFC2
Ensembl hg19 (Hinxton)ENSG00000167702 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167702 [Gene_View]  chr8:144466337-144474116 [Contig_View]  KIFC2 [Vega]
ICGC DataPortalENSG00000167702
TCGA cBioPortalKIFC2
AceView (NCBI)KIFC2
Genatlas (Paris)KIFC2
WikiGenes90990
SOURCE (Princeton)KIFC2
Genetics Home Reference (NIH)KIFC2
Genomic and cartography
GoldenPath hg38 (UCSC)KIFC2  -     chr8:144466337-144474116 +  8q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIFC2  -     8q24.3   [Description]    (hg19-Feb_2009)
EnsemblKIFC2 - 8q24.3 [CytoView hg19]  KIFC2 - 8q24.3 [CytoView hg38]
Mapping of homologs : NCBIKIFC2 [Mapview hg19]  KIFC2 [Mapview hg38]
OMIM615216   
Gene and transcription
Genbank (Entrez)AK055045 AY007121 BC015171 BC017311 BM751216
RefSeq transcript (Entrez)NM_145754
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIFC2
Cluster EST : UnigeneHs.528713 [ NCBI ]
CGAP (NCI)Hs.528713
Alternative Splicing GalleryENSG00000167702
Gene ExpressionKIFC2 [ NCBI-GEO ]   KIFC2 [ EBI - ARRAY_EXPRESS ]   KIFC2 [ SEEK ]   KIFC2 [ MEM ]
Gene Expression Viewer (FireBrowse)KIFC2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90990
GTEX Portal (Tissue expression)KIFC2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96AC6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96AC6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96AC6
Splice isoforms : SwissVarQ96AC6
PhosPhoSitePlusQ96AC6
Domaine pattern : Prosite (Expaxy)KINESIN_MOTOR_1 (PS00411)    KINESIN_MOTOR_2 (PS50067)   
Domains : Interpro (EBI)Kinesin_motor_CS    Kinesin_motor_dom    P-loop_NTPase   
Domain families : Pfam (Sanger)Kinesin (PF00225)   
Domain families : Pfam (NCBI)pfam00225   
Domain families : Smart (EMBL)KISc (SM00129)  
Conserved Domain (NCBI)KIFC2
DMDM Disease mutations90990
Blocks (Seattle)KIFC2
SuperfamilyQ96AC6
Human Protein AtlasENSG00000167702
Peptide AtlasQ96AC6
HPRD13916
IPIIPI00059395   IPI00104850   IPI00983358   
Protein Interaction databases
DIP (DOE-UCLA)Q96AC6
IntAct (EBI)Q96AC6
FunCoupENSG00000167702
BioGRIDKIFC2
STRING (EMBL)KIFC2
ZODIACKIFC2
Ontologies - Pathways
QuickGOQ96AC6
Ontology : AmiGOmicrotubule motor activity  ATP binding  cytoplasm  kinesin complex  microtubule  microtubule-based movement  microtubule binding  ATPase activity  
Ontology : EGO-EBImicrotubule motor activity  ATP binding  cytoplasm  kinesin complex  microtubule  microtubule-based movement  microtubule binding  ATPase activity  
NDEx NetworkKIFC2
Atlas of Cancer Signalling NetworkKIFC2
Wikipedia pathwaysKIFC2
Orthology - Evolution
OrthoDB90990
GeneTree (enSembl)ENSG00000167702
Phylogenetic Trees/Animal Genes : TreeFamKIFC2
HOVERGENQ96AC6
HOGENOMQ96AC6
Homologs : HomoloGeneKIFC2
Homology/Alignments : Family Browser (UCSC)KIFC2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIFC2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIFC2
dbVarKIFC2
ClinVarKIFC2
1000_GenomesKIFC2 
Exome Variant ServerKIFC2
ExAC (Exome Aggregation Consortium)KIFC2 (select the gene name)
Genetic variants : HAPMAP90990
Genomic Variants (DGV)KIFC2 [DGVbeta]
DECIPHERKIFC2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIFC2 
Mutations
ICGC Data PortalKIFC2 
TCGA Data PortalKIFC2 
Broad Tumor PortalKIFC2
OASIS PortalKIFC2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIFC2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIFC2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIFC2
DgiDB (Drug Gene Interaction Database)KIFC2
DoCM (Curated mutations)KIFC2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIFC2 (select a term)
intoGenKIFC2
Cancer3DKIFC2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615216   
Orphanet
MedgenKIFC2
Genetic Testing Registry KIFC2
NextProtQ96AC6 [Medical]
TSGene90990
GENETestsKIFC2
Target ValidationKIFC2
Huge Navigator KIFC2 [HugePedia]
snp3D : Map Gene to Disease90990
BioCentury BCIQKIFC2
ClinGenKIFC2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90990
Chemical/Pharm GKB GenePA134874212
Clinical trialKIFC2
Miscellaneous
canSAR (ICR)KIFC2 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIFC2
EVEXKIFC2
GoPubMedKIFC2
iHOPKIFC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:11:57 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.