Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

KIFC3 (kinesin family member C3)

Identity

Other names-
HGNC (Hugo) KIFC3
LocusID (NCBI) 3801
Location 16q21
Location_base_pair Starts at 57792129 and ends at 57831929 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)KIFC3   6326
Cards
Entrez_Gene (NCBI)KIFC3  3801  kinesin family member C3
GeneCards (Weizmann)KIFC3
Ensembl (Hinxton)ENSG00000140859 [Gene_View]  chr16:57792129-57831929 [Contig_View]  KIFC3 [Vega]
ICGC DataPortalENSG00000140859
AceView (NCBI)KIFC3
Genatlas (Paris)KIFC3
WikiGenes3801
SOURCE (Princeton)NM_001130099 NM_001130100 NM_005550
Genomic and cartography
GoldenPath (UCSC)KIFC3  -  16q21   chr16:57792129-57831929 -  16q21   [Description]    (hg19-Feb_2009)
EnsemblKIFC3 - 16q21 [CytoView]
Mapping of homologs : NCBIKIFC3 [Mapview]
OMIM604535   
Gene and transcription
Genbank (Entrez)AB209290 AF004426 AK091891 AK092013 AK291737
RefSeq transcript (Entrez)NM_001130099 NM_001130100 NM_005550
RefSeq genomic (Entrez)AC_000148 NC_000016 NC_018927 NT_010498 NW_001838290 NW_004929402
Consensus coding sequences : CCDS (NCBI)KIFC3
Cluster EST : UnigeneHs.23131 [ NCBI ]
CGAP (NCI)Hs.23131
Alternative Splicing : Fast-db (Paris)GSHG0011874
Alternative Splicing GalleryENSG00000140859
Gene ExpressionKIFC3 [ NCBI-GEO ]     KIFC3 [ SEEK ]   KIFC3 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BVG8 (Uniprot)
NextProtQ9BVG8  [Medical]
With graphics : InterProQ9BVG8
Splice isoforms : SwissVarQ9BVG8 (Swissvar)
Domaine pattern : Prosite (Expaxy)KINESIN_MOTOR_1 (PS00411)    KINESIN_MOTOR_2 (PS50067)   
Domains : Interpro (EBI)Kinesin-like_fam    Kinesin_motor_CS    Kinesin_motor_dom    P-loop_NTPase   
Related proteins : CluSTrQ9BVG8
Domain families : Pfam (Sanger)Kinesin (PF00225)   
Domain families : Pfam (NCBI)pfam00225   
Domain families : Smart (EMBL)KISc (SM00129)  
DMDM Disease mutations3801
Blocks (Seattle)Q9BVG8
PDB (SRS)2H58   
PDB (PDBSum)2H58   
PDB (IMB)2H58   
PDB (RSDB)2H58   
Human Protein AtlasENSG00000140859
Peptide AtlasQ9BVG8
HPRD05171
IPIIPI00909341   IPI00151119   IPI01013951   IPI01011828   IPI01010998   IPI00867631   IPI01015611   
Protein Interaction databases
DIP (DOE-UCLA)Q9BVG8
IntAct (EBI)Q9BVG8
FunCoupENSG00000140859
BioGRIDKIFC3
InParanoidQ9BVG8
Interologous Interaction database Q9BVG8
IntegromeDBKIFC3
STRING (EMBL)KIFC3
Ontologies - Pathways
Ontology : AmiGOmicrotubule motor activity  ATP binding  Golgi apparatus  centrosome  kinesin complex  microtubule  zonula adherens  microtubule-based movement  Golgi organization  visual perception  microtubule binding  metabolic process  metabolic process  cytoplasmic vesicle membrane  zonula adherens maintenance  extracellular vesicular exosome  epithelial cell-cell adhesion  
Ontology : EGO-EBImicrotubule motor activity  ATP binding  Golgi apparatus  centrosome  kinesin complex  microtubule  zonula adherens  microtubule-based movement  Golgi organization  visual perception  microtubule binding  metabolic process  metabolic process  cytoplasmic vesicle membrane  zonula adherens maintenance  extracellular vesicular exosome  epithelial cell-cell adhesion  
Protein Interaction DatabaseKIFC3
Wikipedia pathwaysKIFC3
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)KIFC3
SNP (GeneSNP Utah)KIFC3
SNP : HGBaseKIFC3
Genetic variants : HAPMAPKIFC3
1000_GenomesKIFC3 
ICGC programENSG00000140859 
CONAN: Copy Number AnalysisKIFC3 
Somatic Mutations in Cancer : COSMICKIFC3 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Mutations and Diseases : HGMDKIFC3
OMIM604535   
MedgenKIFC3
GENETestsKIFC3
Disease Genetic AssociationKIFC3
Huge Navigator KIFC3 [HugePedia]  KIFC3 [HugeCancerGEM]
Genomic VariantsKIFC3  KIFC3 [DGVbeta]
Exome VariantKIFC3
dbVarKIFC3
ClinVarKIFC3
snp3D : Map Gene to Disease3801
General knowledge
Homologs : HomoloGeneKIFC3
Homology/Alignments : Family Browser (UCSC)KIFC3
Phylogenetic Trees/Animal Genes : TreeFamKIFC3
Chemical/Protein Interactions : CTD3801
Chemical/Pharm GKB GenePA30112
Clinical trialKIFC3
Cancer Resource (Charite)ENSG00000140859
Other databases
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
CoreMineKIFC3
iHOPKIFC3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 13 12:54:43 CEST 2014

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.