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KIFC3 (kinesin family member C3)

Identity

Other names-
HGNC (Hugo) KIFC3
LocusID (NCBI) 3801
Atlas_Id 51312
Location 16q21  [Link to chromosome band 16q21]
Location_base_pair Starts at 57792129 and ends at 57831929 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
A2M (12p13.31) / KIFC3 (16q21)CANX (5q35.3) / KIFC3 (16q21)KIFC3 (16q21) / C19orf48 (19q13.33)
KIFC3 (16q21) / CANX (5q35.3)KIFC3 (16q21) / CNGB1 (16q21)KIFC3 (16q21) / INSR (19p13.2)
LAMB3 (1q32.2) / KIFC3 (16q21)PUF60 (8q24.3) / KIFC3 (16q21)KIFC3 16q21 / CNGB1 16q21

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIFC3   6326
Cards
Entrez_Gene (NCBI)KIFC3  3801  kinesin family member C3
Aliases
GeneCards (Weizmann)KIFC3
Ensembl hg19 (Hinxton)ENSG00000140859 [Gene_View]  chr16:57792129-57831929 [Contig_View]  KIFC3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000140859 [Gene_View]  chr16:57792129-57831929 [Contig_View]  KIFC3 [Vega]
ICGC DataPortalENSG00000140859
TCGA cBioPortalKIFC3
AceView (NCBI)KIFC3
Genatlas (Paris)KIFC3
WikiGenes3801
SOURCE (Princeton)KIFC3
Genomic and cartography
GoldenPath hg19 (UCSC)KIFC3  -     chr16:57792129-57831929 -  16q21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIFC3  -     16q21   [Description]    (hg38-Dec_2013)
EnsemblKIFC3 - 16q21 [CytoView hg19]  KIFC3 - 16q21 [CytoView hg38]
Mapping of homologs : NCBIKIFC3 [Mapview hg19]  KIFC3 [Mapview hg38]
OMIM604535   
Gene and transcription
Genbank (Entrez)AB209290 AF004426 AK091891 AK092013 AK291737
RefSeq transcript (Entrez)NM_001130099 NM_001130100 NM_001318710 NM_001318711 NM_001318712 NM_001318713 NM_001318714 NM_001318715 NM_005550
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)KIFC3
Cluster EST : UnigeneHs.23131 [ NCBI ]
CGAP (NCI)Hs.23131
Alternative Splicing GalleryENSG00000140859
Gene ExpressionKIFC3 [ NCBI-GEO ]   KIFC3 [ EBI - ARRAY_EXPRESS ]   KIFC3 [ SEEK ]   KIFC3 [ MEM ]
Gene Expression Viewer (FireBrowse)KIFC3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3801
GTEX Portal (Tissue expression)KIFC3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BVG8 (Uniprot)
NextProtQ9BVG8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BVG8
Splice isoforms : SwissVarQ9BVG8 (Swissvar)
PhosPhoSitePlusQ9BVG8
Domaine pattern : Prosite (Expaxy)KINESIN_MOTOR_1 (PS00411)    KINESIN_MOTOR_2 (PS50067)   
Domains : Interpro (EBI)KIFC3    Kinesin-like_fam    Kinesin_motor_CS    Kinesin_motor_dom    P-loop_NTPase   
Domain families : Pfam (Sanger)Kinesin (PF00225)   
Domain families : Pfam (NCBI)pfam00225   
Domain families : Smart (EMBL)KISc (SM00129)  
DMDM Disease mutations3801
Blocks (Seattle)KIFC3
PDB (SRS)2H58   
PDB (PDBSum)2H58   
PDB (IMB)2H58   
PDB (RSDB)2H58   
Structural Biology KnowledgeBase2H58   
SCOP (Structural Classification of Proteins)2H58   
CATH (Classification of proteins structures)2H58   
SuperfamilyQ9BVG8
Human Protein AtlasENSG00000140859
Peptide AtlasQ9BVG8
HPRD05171
IPIIPI00909341   IPI00151119   IPI01013951   IPI01011828   IPI01010998   IPI00867631   IPI01015611   
Protein Interaction databases
DIP (DOE-UCLA)Q9BVG8
IntAct (EBI)Q9BVG8
FunCoupENSG00000140859
BioGRIDKIFC3
STRING (EMBL)KIFC3
ZODIACKIFC3
Ontologies - Pathways
QuickGOQ9BVG8
Ontology : AmiGOmicrotubule motor activity  protein binding  ATP binding  Golgi apparatus  centrosome  kinesin complex  microtubule  zonula adherens  microtubule-based movement  Golgi organization  visual perception  microtubule binding  metabolic process  ATP-dependent microtubule motor activity, minus-end-directed  ATPase activity  cytoplasmic vesicle membrane  zonula adherens maintenance  extracellular exosome  epithelial cell-cell adhesion  
Ontology : EGO-EBImicrotubule motor activity  protein binding  ATP binding  Golgi apparatus  centrosome  kinesin complex  microtubule  zonula adherens  microtubule-based movement  Golgi organization  visual perception  microtubule binding  metabolic process  ATP-dependent microtubule motor activity, minus-end-directed  ATPase activity  cytoplasmic vesicle membrane  zonula adherens maintenance  extracellular exosome  epithelial cell-cell adhesion  
NDEx Network
Atlas of Cancer Signalling NetworkKIFC3
Wikipedia pathwaysKIFC3
Orthology - Evolution
OrthoDB3801
GeneTree (enSembl)ENSG00000140859
Phylogenetic Trees/Animal Genes : TreeFamKIFC3
Homologs : HomoloGeneKIFC3
Homology/Alignments : Family Browser (UCSC)KIFC3
Gene fusions - Rearrangements
Fusion: TCGAKIFC3 16q21 CNGB1 16q21 LUAD
Polymorphisms : SNP, variants
NCBI Variation ViewerKIFC3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIFC3
dbVarKIFC3
ClinVarKIFC3
1000_GenomesKIFC3 
Exome Variant ServerKIFC3
ExAC (Exome Aggregation Consortium)KIFC3 (select the gene name)
Genetic variants : HAPMAP3801
Genomic Variants (DGV)KIFC3 [DGVbeta]
Mutations
ICGC Data PortalKIFC3 
TCGA Data PortalKIFC3 
Broad Tumor PortalKIFC3
OASIS PortalKIFC3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIFC3 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIFC3
DgiDB (Drug Gene Interaction Database)KIFC3
DoCM (Curated mutations)KIFC3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIFC3 (select a term)
intoGenKIFC3
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)16:57792129-57831929  ENSG00000140859
CONAN: Copy Number AnalysisKIFC3 
Mutations and Diseases : HGMDKIFC3
OMIM604535   
MedgenKIFC3
Genetic Testing Registry KIFC3
NextProtQ9BVG8 [Medical]
TSGene3801
GENETestsKIFC3
Huge Navigator KIFC3 [HugePedia]
snp3D : Map Gene to Disease3801
BioCentury BCIQKIFC3
ClinGenKIFC3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3801
Chemical/Pharm GKB GenePA30112
Clinical trialKIFC3
Miscellaneous
canSAR (ICR)KIFC3 (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIFC3
EVEXKIFC3
GoPubMedKIFC3
iHOPKIFC3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 9 19:04:51 CEST 2016

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