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KIN (Kin17 DNA and RNA binding protein)

Identity

Alias (NCBI)BTCD
KIN17
Rts2
HGNC (Hugo) KIN
HGNC Alias symbKIN17
Rts2
HGNC Previous nameantigenic determinant of recA protein (mouse) homolog
 KIN, antigenic determinant of recA protein homolog (mouse)
LocusID (NCBI) 22944
Atlas_Id 43333
Location 10p14  [Link to chromosome band 10p14]
Location_base_pair Starts at 7750962 and ends at 7787993 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KIN (10p14) / KIN (10p14)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)KIN   6327
Cards
Entrez_Gene (NCBI)KIN    Kin17 DNA and RNA binding protein
AliasesBTCD; KIN17; Rts2
GeneCards (Weizmann)KIN
Ensembl hg19 (Hinxton)ENSG00000151657 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151657 [Gene_View]  ENSG00000151657 [Sequence]  chr10:7750962-7787993 [Contig_View]  KIN [Vega]
ICGC DataPortalENSG00000151657
TCGA cBioPortalKIN
AceView (NCBI)KIN
Genatlas (Paris)KIN
SOURCE (Princeton)KIN
Genetics Home Reference (NIH)KIN
Genomic and cartography
GoldenPath hg38 (UCSC)KIN  -     chr10:7750962-7787993 -  10p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIN  -     10p14   [Description]    (hg19-Feb_2009)
GoldenPathKIN - 10p14 [CytoView hg19]  KIN - 10p14 [CytoView hg38]
ImmunoBaseENSG00000151657
Genome Data Viewer NCBIKIN [Mapview hg19]  
OMIM601720   
Gene and transcription
Genbank (Entrez)AA768850 AJ005273 AK296637 AK301789 AK309059
RefSeq transcript (Entrez)NM_012311
Consensus coding sequences : CCDS (NCBI)KIN
Gene ExpressionKIN [ NCBI-GEO ]   KIN [ EBI - ARRAY_EXPRESS ]   KIN [ SEEK ]   KIN [ MEM ]
Gene Expression Viewer (FireBrowse)KIN [ Firebrowse - Broad ]
GenevisibleExpression of KIN in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22944
GTEX Portal (Tissue expression)KIN
Human Protein AtlasENSG00000151657-KIN [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60870   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60870  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60870
PhosPhoSitePlusO60870
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)   
Domains : Interpro (EBI)DNA/RNA-bd_Kin17_cons_domain    KIN17-like    KIN17_WH-like_sf    KN17_SH3    KOW_KIN17    Rib_L2_dom2    Znf_C2H2_sf   
Domain families : Pfam (Sanger)Kin17_mid (PF10357)    KN17_SH3 (PF18131)   
Domain families : Pfam (NCBI)pfam10357    pfam18131   
Domain families : Smart (EMBL)Kin17_mid (SM01253)  
Conserved Domain (NCBI)KIN
PDB (RSDB)2CKK    2V1N   
PDB Europe2CKK    2V1N   
PDB (PDBSum)2CKK    2V1N   
PDB (IMB)2CKK    2V1N   
Structural Biology KnowledgeBase2CKK    2V1N   
SCOP (Structural Classification of Proteins)2CKK    2V1N   
CATH (Classification of proteins structures)2CKK    2V1N   
SuperfamilyO60870
AlphaFold pdb e-kbO60870   
Human Protein Atlas [tissue]ENSG00000151657-KIN [tissue]
HPRD03425
Protein Interaction databases
DIP (DOE-UCLA)O60870
IntAct (EBI)O60870
BioGRIDKIN
STRING (EMBL)KIN
ZODIACKIN
Ontologies - Pathways
QuickGOO60870
Ontology : AmiGODNA binding  double-stranded DNA binding  double-stranded DNA binding  RNA binding  protein binding  nucleus  nucleoplasm  nucleoplasm  cytoplasm  DNA replication  DNA replication  DNA repair  DNA recombination  mRNA processing  cellular response to DNA damage stimulus  cellular response to DNA damage stimulus  nuclear matrix  protein-containing complex  intracellular membrane-bounded organelle  metal ion binding  
Ontology : EGO-EBIDNA binding  double-stranded DNA binding  double-stranded DNA binding  RNA binding  protein binding  nucleus  nucleoplasm  nucleoplasm  cytoplasm  DNA replication  DNA replication  DNA repair  DNA recombination  mRNA processing  cellular response to DNA damage stimulus  cellular response to DNA damage stimulus  nuclear matrix  protein-containing complex  intracellular membrane-bounded organelle  metal ion binding  
NDEx NetworkKIN
Atlas of Cancer Signalling NetworkKIN
Wikipedia pathwaysKIN
Orthology - Evolution
OrthoDB22944
GeneTree (enSembl)ENSG00000151657
Phylogenetic Trees/Animal Genes : TreeFamKIN
Homologs : HomoloGeneKIN
Homology/Alignments : Family Browser (UCSC)KIN
Gene fusions - Rearrangements
Fusion : QuiverKIN
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIN
dbVarKIN
ClinVarKIN
MonarchKIN
1000_GenomesKIN 
Exome Variant ServerKIN
GNOMAD BrowserENSG00000151657
Varsome BrowserKIN
ACMGKIN variants
VarityO60870
Genomic Variants (DGV)KIN [DGVbeta]
DECIPHERKIN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIN 
Mutations
ICGC Data PortalKIN 
TCGA Data PortalKIN 
Broad Tumor PortalKIN
OASIS PortalKIN [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIN  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DKIN
Mutations and Diseases : HGMDKIN
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaKIN
DgiDB (Drug Gene Interaction Database)KIN
DoCM (Curated mutations)KIN
CIViC (Clinical Interpretations of Variants in Cancer)KIN
Cancer3DKIN
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601720   
Orphanet
DisGeNETKIN
MedgenKIN
Genetic Testing Registry KIN
NextProtO60870 [Medical]
GENETestsKIN
Target ValidationKIN
Huge Navigator KIN [HugePedia]
ClinGenKIN
Clinical trials, drugs, therapy
MyCancerGenomeKIN
Protein Interactions : CTDKIN
Pharm GKB GenePA30113
PharosO60870
Clinical trialKIN
Miscellaneous
canSAR (ICR)KIN
HarmonizomeKIN
DataMed IndexKIN
Probes
Litterature
PubMed41 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXKIN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:15:02 CEST 2021

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