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KIN (Kin17 DNA and RNA binding protein)

Identity

Alias_namesantigenic determinant of recA protein (mouse) homolog
KIN, antigenic determinant of recA protein homolog (mouse)
Alias_symbol (synonym)KIN17
Rts2
Other aliasBTCD
HGNC (Hugo) KIN
LocusID (NCBI) 22944
Atlas_Id 43333
Location 10p14  [Link to chromosome band 10p14]
Location_base_pair Starts at 7750962 and ends at 7788027 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KIN (10p14) / KIN (10p14)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIN   6327
Cards
Entrez_Gene (NCBI)KIN  22944  Kin17 DNA and RNA binding protein
AliasesBTCD; KIN17; Rts2
GeneCards (Weizmann)KIN
Ensembl hg19 (Hinxton)ENSG00000151657 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151657 [Gene_View]  chr10:7750962-7788027 [Contig_View]  KIN [Vega]
ICGC DataPortalENSG00000151657
TCGA cBioPortalKIN
AceView (NCBI)KIN
Genatlas (Paris)KIN
WikiGenes22944
SOURCE (Princeton)KIN
Genetics Home Reference (NIH)KIN
Genomic and cartography
GoldenPath hg38 (UCSC)KIN  -     chr10:7750962-7788027 -  10p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIN  -     10p14   [Description]    (hg19-Feb_2009)
EnsemblKIN - 10p14 [CytoView hg19]  KIN - 10p14 [CytoView hg38]
Mapping of homologs : NCBIKIN [Mapview hg19]  KIN [Mapview hg38]
OMIM601720   
Gene and transcription
Genbank (Entrez)AA768850 AJ005273 AK296637 AK301789 AK309059
RefSeq transcript (Entrez)NM_012311
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIN
Cluster EST : UnigeneHs.397918 [ NCBI ]
CGAP (NCI)Hs.397918
Alternative Splicing GalleryENSG00000151657
Gene ExpressionKIN [ NCBI-GEO ]   KIN [ EBI - ARRAY_EXPRESS ]   KIN [ SEEK ]   KIN [ MEM ]
Gene Expression Viewer (FireBrowse)KIN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22944
GTEX Portal (Tissue expression)KIN
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60870   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60870  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60870
Splice isoforms : SwissVarO60870
PhosPhoSitePlusO60870
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)   
Domains : Interpro (EBI)DNA/RNA-bd_Kin17_cons_domain   
Domain families : Pfam (Sanger)Kin17_mid (PF10357)   
Domain families : Pfam (NCBI)pfam10357   
Domain families : Smart (EMBL)Kin17_mid (SM01253)  
Conserved Domain (NCBI)KIN
DMDM Disease mutations22944
Blocks (Seattle)KIN
PDB (SRS)2CKK    2V1N   
PDB (PDBSum)2CKK    2V1N   
PDB (IMB)2CKK    2V1N   
PDB (RSDB)2CKK    2V1N   
Structural Biology KnowledgeBase2CKK    2V1N   
SCOP (Structural Classification of Proteins)2CKK    2V1N   
CATH (Classification of proteins structures)2CKK    2V1N   
SuperfamilyO60870
Human Protein AtlasENSG00000151657
Peptide AtlasO60870
HPRD03425
IPIIPI00017580   IPI01012158   IPI00921892   
Protein Interaction databases
DIP (DOE-UCLA)O60870
IntAct (EBI)O60870
FunCoupENSG00000151657
BioGRIDKIN
STRING (EMBL)KIN
ZODIACKIN
Ontologies - Pathways
QuickGOO60870
Ontology : AmiGODNA binding  double-stranded DNA binding  double-stranded DNA binding  RNA binding  nucleus  nucleoplasm  cytoplasm  DNA replication  DNA repair  DNA recombination  mRNA processing  protein methylation  cellular response to DNA damage stimulus  viral process  nuclear matrix  intracellular membrane-bounded organelle  metal ion binding  
Ontology : EGO-EBIDNA binding  double-stranded DNA binding  double-stranded DNA binding  RNA binding  nucleus  nucleoplasm  cytoplasm  DNA replication  DNA repair  DNA recombination  mRNA processing  protein methylation  cellular response to DNA damage stimulus  viral process  nuclear matrix  intracellular membrane-bounded organelle  metal ion binding  
NDEx NetworkKIN
Atlas of Cancer Signalling NetworkKIN
Wikipedia pathwaysKIN
Orthology - Evolution
OrthoDB22944
GeneTree (enSembl)ENSG00000151657
Phylogenetic Trees/Animal Genes : TreeFamKIN
HOVERGENO60870
HOGENOMO60870
Homologs : HomoloGeneKIN
Homology/Alignments : Family Browser (UCSC)KIN
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIN
dbVarKIN
ClinVarKIN
1000_GenomesKIN 
Exome Variant ServerKIN
ExAC (Exome Aggregation Consortium)KIN (select the gene name)
Genetic variants : HAPMAP22944
Genomic Variants (DGV)KIN [DGVbeta]
DECIPHERKIN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIN 
Mutations
ICGC Data PortalKIN 
TCGA Data PortalKIN 
Broad Tumor PortalKIN
OASIS PortalKIN [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIN  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIN
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIN
DgiDB (Drug Gene Interaction Database)KIN
DoCM (Curated mutations)KIN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIN (select a term)
intoGenKIN
Cancer3DKIN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601720   
Orphanet
MedgenKIN
Genetic Testing Registry KIN
NextProtO60870 [Medical]
TSGene22944
GENETestsKIN
Target ValidationKIN
Huge Navigator KIN [HugePedia]
snp3D : Map Gene to Disease22944
BioCentury BCIQKIN
ClinGenKIN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22944
Chemical/Pharm GKB GenePA30113
Clinical trialKIN
Miscellaneous
canSAR (ICR)KIN (select the gene name)
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIN
EVEXKIN
GoPubMedKIN
iHOPKIN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:04:43 CEST 2017

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