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KIR2DL2 (killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 2)

Identity

Alias_nameskiller cell immunoglobulin-like receptor
Alias_symbol (synonym)cl-43
nkat6
CD158B1
CD158k
Other aliasCD158b
NKAT-6
NKAT6
p58.2
HGNC (Hugo) KIR2DL2
LocusID (NCBI) 3803
Atlas_Id 51115
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54738517 and ends at 54784324 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIR2DL2   6330
Cards
Entrez_Gene (NCBI)KIR2DL2  3803  killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 2
AliasesCD158B1; CD158b; NKAT-6; NKAT6; 
p58.2
GeneCards (Weizmann)KIR2DL2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:54738517-54784324 [Contig_View]  KIR2DL2 [Vega]
TCGA cBioPortalKIR2DL2
AceView (NCBI)KIR2DL2
Genatlas (Paris)KIR2DL2
WikiGenes3803
SOURCE (Princeton)KIR2DL2
Genetics Home Reference (NIH)KIR2DL2
Genomic and cartography
GoldenPath hg38 (UCSC)KIR2DL2  -     chr19:54738517-54784324 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIR2DL2  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblKIR2DL2 - 19q13.42 [CytoView hg19]  KIR2DL2 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIKIR2DL2 [Mapview hg19]  KIR2DL2 [Mapview hg38]
OMIM604937   
Gene and transcription
Genbank (Entrez)AF285434 AY366242 BC152936 KP260924 L76669
RefSeq transcript (Entrez)NM_014219
RefSeq genomic (Entrez)NG_005994 NG_046935 NT_113949 NT_187636 NT_187638 NT_187640 NT_187642 NT_187644 NT_187668 NT_187670 NT_187675 NT_187677 NT_187686 NW_003571056 NW_003571061
Consensus coding sequences : CCDS (NCBI)KIR2DL2
Cluster EST : UnigeneHs.743949 [ NCBI ]
CGAP (NCI)Hs.743949
Gene ExpressionKIR2DL2 [ NCBI-GEO ]   KIR2DL2 [ EBI - ARRAY_EXPRESS ]   KIR2DL2 [ SEEK ]   KIR2DL2 [ MEM ]
Gene Expression Viewer (FireBrowse)KIR2DL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3803
GTEX Portal (Tissue expression)KIR2DL2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP43627   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP43627  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP43627
Splice isoforms : SwissVarP43627
PhosPhoSitePlusP43627
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Immunoglobulin   
Domain families : Pfam (Sanger)ig (PF00047)   
Domain families : Pfam (NCBI)pfam00047   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)KIR2DL2
DMDM Disease mutations3803
Blocks (Seattle)KIR2DL2
PDB (SRS)1EFX    2DL2    2DLI   
PDB (PDBSum)1EFX    2DL2    2DLI   
PDB (IMB)1EFX    2DL2    2DLI   
PDB (RSDB)1EFX    2DL2    2DLI   
Structural Biology KnowledgeBase1EFX    2DL2    2DLI   
SCOP (Structural Classification of Proteins)1EFX    2DL2    2DLI   
CATH (Classification of proteins structures)1EFX    2DL2    2DLI   
SuperfamilyP43627
Peptide AtlasP43627
HPRD16080
IPI###############################################################################################################################################################################################################################################################   
Protein Interaction databases
DIP (DOE-UCLA)P43627
IntAct (EBI)P43627
BioGRIDKIR2DL2
STRING (EMBL)KIR2DL2
ZODIACKIR2DL2
Ontologies - Pathways
QuickGOP43627
Ontology : AmiGOplasma membrane  integral component of membrane  regulation of immune response  
Ontology : EGO-EBIplasma membrane  integral component of membrane  regulation of immune response  
Pathways : KEGGAntigen processing and presentation    Natural killer cell mediated cytotoxicity    Graft-versus-host disease   
NDEx NetworkKIR2DL2
Atlas of Cancer Signalling NetworkKIR2DL2
Wikipedia pathwaysKIR2DL2
Orthology - Evolution
OrthoDB3803
Phylogenetic Trees/Animal Genes : TreeFamKIR2DL2
HOVERGENP43627
HOGENOMP43627
Homologs : HomoloGeneKIR2DL2
Homology/Alignments : Family Browser (UCSC)KIR2DL2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIR2DL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIR2DL2
dbVarKIR2DL2
ClinVarKIR2DL2
1000_GenomesKIR2DL2 
Exome Variant ServerKIR2DL2
ExAC (Exome Aggregation Consortium)KIR2DL2 (select the gene name)
Genetic variants : HAPMAP3803
Genomic Variants (DGV)KIR2DL2 [DGVbeta]
DECIPHERKIR2DL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIR2DL2 
Mutations
ICGC Data PortalKIR2DL2 
TCGA Data PortalKIR2DL2 
Broad Tumor PortalKIR2DL2
OASIS PortalKIR2DL2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDKIR2DL2
BioMutasearch KIR2DL2
DgiDB (Drug Gene Interaction Database)KIR2DL2
DoCM (Curated mutations)KIR2DL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIR2DL2 (select a term)
intoGenKIR2DL2
Cancer3DKIR2DL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604937   
Orphanet
MedgenKIR2DL2
Genetic Testing Registry KIR2DL2
NextProtP43627 [Medical]
TSGene3803
GENETestsKIR2DL2
Target ValidationKIR2DL2
Huge Navigator KIR2DL2 [HugePedia]
snp3D : Map Gene to Disease3803
BioCentury BCIQKIR2DL2
ClinGenKIR2DL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3803
Chemical/Pharm GKB GenePA30115
Clinical trialKIR2DL2
Miscellaneous
canSAR (ICR)KIR2DL2 (select the gene name)
Probes
Litterature
PubMed150 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIR2DL2
EVEXKIR2DL2
GoPubMedKIR2DL2
iHOPKIR2DL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:04:44 CEST 2017

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