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KIR2DL5A (killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 5A)

Identity

Other aliasCD158F
KIR2DL5
KIR2DL5.1
KIR2DL5.3
HGNC (Hugo) KIR2DL5A
LocusID (NCBI) 57292
Atlas_Id 56933
Location 19_KI270932v1_alt  [Link to chromosome band 19]
Location_base_pair Starts at 133384 and ends at 142868 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)KIR2DL5A   16345
Cards
Entrez_Gene (NCBI)KIR2DL5A  57292  killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 5A
AliasesCD158F; KIR2DL5; KIR2DL5.1; KIR2DL5.3
GeneCards (Weizmann)KIR2DL5A
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19_KI270932v1_alt:133384-142868 [Contig_View]  KIR2DL5A [Vega]
TCGA cBioPortalKIR2DL5A
AceView (NCBI)KIR2DL5A
Genatlas (Paris)KIR2DL5A
WikiGenes57292
SOURCE (Princeton)KIR2DL5A
Genetics Home Reference (NIH)KIR2DL5A
Genomic and cartography
GoldenPath hg38 (UCSC)KIR2DL5A  -     chr19_KI270932v1_alt:133384-142868 -  19_KI270932v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIR2DL5A  -     19_KI270932v1_alt   [Description]    (hg19-Feb_2009)
EnsemblKIR2DL5A - 19_KI270932v1_alt [CytoView hg19]  KIR2DL5A - 19_KI270932v1_alt [CytoView hg38]
Mapping of homologs : NCBIKIR2DL5A [Mapview hg19]  KIR2DL5A [Mapview hg38]
OMIM605305   
Gene and transcription
Genbank (Entrez)AF204903 AF217487 BC160063
RefSeq transcript (Entrez)NM_020535
RefSeq genomic (Entrez)NG_005994 NT_113949 NT_187636 NT_187641 NT_187644 NT_187670 NT_187675 NW_003571055
Consensus coding sequences : CCDS (NCBI)KIR2DL5A
Cluster EST : UnigeneHs.740906 [ NCBI ]
CGAP (NCI)Hs.740906
Gene ExpressionKIR2DL5A [ NCBI-GEO ]   KIR2DL5A [ EBI - ARRAY_EXPRESS ]   KIR2DL5A [ SEEK ]   KIR2DL5A [ MEM ]
Gene Expression Viewer (FireBrowse)KIR2DL5A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57292
GTEX Portal (Tissue expression)KIR2DL5A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N109   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N109  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N109
Splice isoforms : SwissVarQ8N109
PhosPhoSitePlusQ8N109
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Immunoglobulin   
Domain families : Pfam (Sanger)ig (PF00047)   
Domain families : Pfam (NCBI)pfam00047   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)KIR2DL5A
DMDM Disease mutations57292
Blocks (Seattle)KIR2DL5A
SuperfamilyQ8N109
Peptide AtlasQ8N109
IPIIPI00745311   
Protein Interaction databases
DIP (DOE-UCLA)Q8N109
IntAct (EBI)Q8N109
BioGRIDKIR2DL5A
STRING (EMBL)KIR2DL5A
ZODIACKIR2DL5A
Ontologies - Pathways
QuickGOQ8N109
Ontology : AmiGOplasma membrane  integral component of membrane  
Ontology : EGO-EBIplasma membrane  integral component of membrane  
Pathways : KEGGAntigen processing and presentation    Natural killer cell mediated cytotoxicity    Graft-versus-host disease   
NDEx NetworkKIR2DL5A
Atlas of Cancer Signalling NetworkKIR2DL5A
Wikipedia pathwaysKIR2DL5A
Orthology - Evolution
OrthoDB57292
Phylogenetic Trees/Animal Genes : TreeFamKIR2DL5A
HOVERGENQ8N109
HOGENOMQ8N109
Homologs : HomoloGeneKIR2DL5A
Homology/Alignments : Family Browser (UCSC)KIR2DL5A
Gene fusions - Rearrangements
Tumor Fusion PortalKIR2DL5A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIR2DL5A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIR2DL5A
dbVarKIR2DL5A
ClinVarKIR2DL5A
1000_GenomesKIR2DL5A 
Exome Variant ServerKIR2DL5A
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP57292
Genomic Variants (DGV)KIR2DL5A [DGVbeta]
DECIPHERKIR2DL5A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIR2DL5A 
Mutations
ICGC Data PortalKIR2DL5A 
TCGA Data PortalKIR2DL5A 
Broad Tumor PortalKIR2DL5A
OASIS PortalKIR2DL5A [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDKIR2DL5A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIR2DL5A
DgiDB (Drug Gene Interaction Database)KIR2DL5A
DoCM (Curated mutations)KIR2DL5A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIR2DL5A (select a term)
intoGenKIR2DL5A
Cancer3DKIR2DL5A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605305   
Orphanet
DisGeNETKIR2DL5A
MedgenKIR2DL5A
Genetic Testing Registry KIR2DL5A
NextProtQ8N109 [Medical]
TSGene57292
GENETestsKIR2DL5A
Target ValidationKIR2DL5A
Huge Navigator KIR2DL5A [HugePedia]
snp3D : Map Gene to Disease57292
BioCentury BCIQKIR2DL5A
ClinGenKIR2DL5A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57292
Chemical/Pharm GKB GenePA142671590
Clinical trialKIR2DL5A
Miscellaneous
canSAR (ICR)KIR2DL5A (select the gene name)
Probes
Litterature
PubMed97 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIR2DL5A
EVEXKIR2DL5A
GoPubMedKIR2DL5A
iHOPKIR2DL5A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:18:59 CET 2017

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