Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

KIR2DS1 (killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 1)

Identity

Alias_nameskiller cell immunoglobulin-like receptor
Alias_symbol (synonym)EB6ActI
EB6ActII
CD158H
Other aliasCD158a
p50.1
HGNC (Hugo) KIR2DS1
LocusID (NCBI) 3806
Atlas_Id 52890
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54755010 and ends at 54848116 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIR2DS1   6333
Cards
Entrez_Gene (NCBI)KIR2DS1  3806  killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 1
AliasesCD158H; CD158a; p50.1
GeneCards (Weizmann)KIR2DS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:54755010-54848116 [Contig_View]  KIR2DS1 [Vega]
TCGA cBioPortalKIR2DS1
AceView (NCBI)KIR2DS1
Genatlas (Paris)KIR2DS1
WikiGenes3806
SOURCE (Princeton)KIR2DS1
Genetics Home Reference (NIH)KIR2DS1
Genomic and cartography
GoldenPath hg38 (UCSC)KIR2DS1  -     chr19:54755010-54848116 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIR2DS1  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblKIR2DS1 - 19q13.42 [CytoView hg19]  KIR2DS1 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIKIR2DS1 [Mapview hg19]  KIR2DS1 [Mapview hg38]
OMIM604952   
Gene and transcription
Genbank (Entrez)AF022046 AF285437 AM999888 BC096725 BC166637
RefSeq transcript (Entrez)NM_014512
RefSeq genomic (Entrez)NG_005994 NG_012802 NG_046935 NT_113949 NT_187636 NT_187641 NT_187644 NT_187670 NT_187675 NW_003571055 NW_003571057
Consensus coding sequences : CCDS (NCBI)KIR2DS1
Cluster EST : UnigeneHs.744319 [ NCBI ]
CGAP (NCI)Hs.744319
Gene ExpressionKIR2DS1 [ NCBI-GEO ]   KIR2DS1 [ EBI - ARRAY_EXPRESS ]   KIR2DS1 [ SEEK ]   KIR2DS1 [ MEM ]
Gene Expression Viewer (FireBrowse)KIR2DS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3806
GTEX Portal (Tissue expression)KIR2DS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14954   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14954  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14954
Splice isoforms : SwissVarQ14954
PhosPhoSitePlusQ14954
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Immunoglobulin   
Domain families : Pfam (Sanger)ig (PF00047)   
Domain families : Pfam (NCBI)pfam00047   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)KIR2DS1
DMDM Disease mutations3806
Blocks (Seattle)KIR2DS1
SuperfamilyQ14954
Peptide AtlasQ14954
HPRD05384
IPIIPI00292723   
Protein Interaction databases
DIP (DOE-UCLA)Q14954
IntAct (EBI)Q14954
BioGRIDKIR2DS1
STRING (EMBL)KIR2DS1
ZODIACKIR2DS1
Ontologies - Pathways
QuickGOQ14954
Ontology : AmiGOtransmembrane signaling receptor activity  plasma membrane  immune response  signal transduction  integral component of membrane  innate immune response  regulation of immune response  
Ontology : EGO-EBItransmembrane signaling receptor activity  plasma membrane  immune response  signal transduction  integral component of membrane  innate immune response  regulation of immune response  
Pathways : KEGGAntigen processing and presentation    Natural killer cell mediated cytotoxicity   
NDEx NetworkKIR2DS1
Atlas of Cancer Signalling NetworkKIR2DS1
Wikipedia pathwaysKIR2DS1
Orthology - Evolution
OrthoDB3806
Phylogenetic Trees/Animal Genes : TreeFamKIR2DS1
HOVERGENQ14954
HOGENOMQ14954
Homologs : HomoloGeneKIR2DS1
Homology/Alignments : Family Browser (UCSC)KIR2DS1
Gene fusions - Rearrangements
Tumor Fusion PortalKIR2DS1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIR2DS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIR2DS1
dbVarKIR2DS1
ClinVarKIR2DS1
1000_GenomesKIR2DS1 
Exome Variant ServerKIR2DS1
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP3806
Genomic Variants (DGV)KIR2DS1 [DGVbeta]
DECIPHERKIR2DS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIR2DS1 
Mutations
ICGC Data PortalKIR2DS1 
TCGA Data PortalKIR2DS1 
Broad Tumor PortalKIR2DS1
OASIS PortalKIR2DS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDKIR2DS1
BioMutasearch KIR2DS1
DgiDB (Drug Gene Interaction Database)KIR2DS1
DoCM (Curated mutations)KIR2DS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIR2DS1 (select a term)
intoGenKIR2DS1
Cancer3DKIR2DS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604952   
Orphanet
DisGeNETKIR2DS1
MedgenKIR2DS1
Genetic Testing Registry KIR2DS1
NextProtQ14954 [Medical]
TSGene3806
GENETestsKIR2DS1
Target ValidationKIR2DS1
Huge Navigator KIR2DS1 [HugePedia]
snp3D : Map Gene to Disease3806
BioCentury BCIQKIR2DS1
ClinGenKIR2DS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3806
Chemical/Pharm GKB GenePA30118
Clinical trialKIR2DS1
Miscellaneous
canSAR (ICR)KIR2DS1 (select the gene name)
Probes
Litterature
PubMed130 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIR2DS1
EVEXKIR2DS1
GoPubMedKIR2DS1
iHOPKIR2DS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:19:00 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.