Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KIR3DL1 (killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1)

Identity

Alias_namesKIR
killer cell immunoglobulin-like receptor
Alias_symbol (synonym)cl-2
NKB1
cl-11
nkat3
NKB1B
AMB11
CD158e1/2
CD158E1
CD158e2
Other aliasKIR3DL1/S1
NKAT-3
NKAT3
HGNC (Hugo) KIR3DL1
LocusID (NCBI) 3811
Atlas_Id 53362
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54816438 and ends at 54830778 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIR3DL1   6338
Cards
Entrez_Gene (NCBI)KIR3DL1  3811  killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1
AliasesCD158E1; KIR; KIR3DL1/S1; NKAT-3; 
NKAT3; NKB1; NKB1B
GeneCards (Weizmann)KIR3DL1
Ensembl hg19 (Hinxton)ENSG00000167633 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167633 [Gene_View]  chr19:54816438-54830778 [Contig_View]  KIR3DL1 [Vega]
ICGC DataPortalENSG00000167633
TCGA cBioPortalKIR3DL1
AceView (NCBI)KIR3DL1
Genatlas (Paris)KIR3DL1
WikiGenes3811
SOURCE (Princeton)KIR3DL1
Genetics Home Reference (NIH)KIR3DL1
Genomic and cartography
GoldenPath hg38 (UCSC)KIR3DL1  -     chr19:54816438-54830778 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIR3DL1  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblKIR3DL1 - 19q13.42 [CytoView hg19]  KIR3DL1 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIKIR3DL1 [Mapview hg19]  KIR3DL1 [Mapview hg38]
OMIM604946   609423   
Gene and transcription
Genbank (Entrez)###############################################################################################################################################################################################################################################################
RefSeq transcript (Entrez)NM_001322168 NM_013289
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIR3DL1
Cluster EST : UnigeneHs.645228 [ NCBI ]
CGAP (NCI)Hs.645228
Alternative Splicing GalleryENSG00000167633
Gene ExpressionKIR3DL1 [ NCBI-GEO ]   KIR3DL1 [ EBI - ARRAY_EXPRESS ]   KIR3DL1 [ SEEK ]   KIR3DL1 [ MEM ]
Gene Expression Viewer (FireBrowse)KIR3DL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3811
GTEX Portal (Tissue expression)KIR3DL1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP43629   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP43629  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP43629
Splice isoforms : SwissVarP43629
PhosPhoSitePlusP43629
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Immunoglobulin   
Domain families : Pfam (Sanger)ig (PF00047)   
Domain families : Pfam (NCBI)pfam00047   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)KIR3DL1
DMDM Disease mutations3811
Blocks (Seattle)KIR3DL1
PDB (SRS)3VH8    3WUW    5B38    5B39   
PDB (PDBSum)3VH8    3WUW    5B38    5B39   
PDB (IMB)3VH8    3WUW    5B38    5B39   
PDB (RSDB)3VH8    3WUW    5B38    5B39   
Structural Biology KnowledgeBase3VH8    3WUW    5B38    5B39   
SCOP (Structural Classification of Proteins)3VH8    3WUW    5B38    5B39   
CATH (Classification of proteins structures)3VH8    3WUW    5B38    5B39   
SuperfamilyP43629
Human Protein AtlasENSG00000167633
Peptide AtlasP43629
HPRD09226
IPIIPI00940648   IPI00432463   IPI00383528   IPI00001565   IPI00164978   IPI00892913   
Protein Interaction databases
DIP (DOE-UCLA)P43629
IntAct (EBI)P43629
FunCoupENSG00000167633
BioGRIDKIR3DL1
STRING (EMBL)KIR3DL1
ZODIACKIR3DL1
Ontologies - Pathways
QuickGOP43629
Ontology : AmiGOplasma membrane  integral component of plasma membrane  immune response  signal transduction  HLA-B specific inhibitory MHC class I receptor activity  natural killer cell mediated cytotoxicity  regulation of immune response  
Ontology : EGO-EBIplasma membrane  integral component of plasma membrane  immune response  signal transduction  HLA-B specific inhibitory MHC class I receptor activity  natural killer cell mediated cytotoxicity  regulation of immune response  
Pathways : KEGGAntigen processing and presentation    Natural killer cell mediated cytotoxicity    Graft-versus-host disease   
NDEx NetworkKIR3DL1
Atlas of Cancer Signalling NetworkKIR3DL1
Wikipedia pathwaysKIR3DL1
Orthology - Evolution
OrthoDB3811
GeneTree (enSembl)ENSG00000167633
Phylogenetic Trees/Animal Genes : TreeFamKIR3DL1
HOVERGENP43629
HOGENOMP43629
Homologs : HomoloGeneKIR3DL1
Homology/Alignments : Family Browser (UCSC)KIR3DL1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIR3DL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIR3DL1
dbVarKIR3DL1
ClinVarKIR3DL1
1000_GenomesKIR3DL1 
Exome Variant ServerKIR3DL1
ExAC (Exome Aggregation Consortium)KIR3DL1 (select the gene name)
Genetic variants : HAPMAP3811
Genomic Variants (DGV)KIR3DL1 [DGVbeta]
DECIPHERKIR3DL1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIR3DL1 
Mutations
ICGC Data PortalKIR3DL1 
TCGA Data PortalKIR3DL1 
Broad Tumor PortalKIR3DL1
OASIS PortalKIR3DL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIR3DL1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIR3DL1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIR3DL1
DgiDB (Drug Gene Interaction Database)KIR3DL1
DoCM (Curated mutations)KIR3DL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIR3DL1 (select a term)
intoGenKIR3DL1
Cancer3DKIR3DL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604946    609423   
Orphanet
MedgenKIR3DL1
Genetic Testing Registry KIR3DL1
NextProtP43629 [Medical]
TSGene3811
GENETestsKIR3DL1
Target ValidationKIR3DL1
Huge Navigator KIR3DL1 [HugePedia]
snp3D : Map Gene to Disease3811
BioCentury BCIQKIR3DL1
ClinGenKIR3DL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3811
Chemical/Pharm GKB GenePA30123
Clinical trialKIR3DL1
Miscellaneous
canSAR (ICR)KIR3DL1 (select the gene name)
Probes
Litterature
PubMed198 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIR3DL1
EVEXKIR3DL1
GoPubMedKIR3DL1
iHOPKIR3DL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:57:07 CEST 2017

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