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KIR3DS1 (killer cell immunoglobulin like receptor, three Ig domains and short cytoplasmic tail 1)

Identity

Alias_nameskiller cell immunoglobulin-like receptor
Alias_symbol (synonym)nkat10
Other aliasCD158E2
KIR-123FM
KIR-G1
NKAT-10
NKAT10
HGNC (Hugo) KIR3DS1
LocusID (NCBI) 3813
Atlas_Id 51062
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54816464 and ends at 54867095 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIR3DS1   6340
Cards
Entrez_Gene (NCBI)KIR3DS1  3813  killer cell immunoglobulin like receptor, three Ig domains and short cytoplasmic tail 1
AliasesCD158E2; KIR-123FM; KIR-G1; NKAT-10; 
NKAT10
GeneCards (Weizmann)KIR3DS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:54816464-54867095 [Contig_View]  KIR3DS1 [Vega]
TCGA cBioPortalKIR3DS1
AceView (NCBI)KIR3DS1
Genatlas (Paris)KIR3DS1
WikiGenes3813
SOURCE (Princeton)KIR3DS1
Genetics Home Reference (NIH)KIR3DS1
Genomic and cartography
GoldenPath hg38 (UCSC)KIR3DS1  -     chr19:54816464-54867095 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIR3DS1  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblKIR3DS1 - 19q13.42 [CytoView hg19]  KIR3DS1 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIKIR3DS1 [Mapview hg19]  KIR3DS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF022044 AJ417558 AK301140 BC098107 BC098288
RefSeq transcript (Entrez)NM_001083539 NM_001282170 NM_001282171
RefSeq genomic (Entrez)NG_005994 NT_113949 NT_187636 NT_187641 NT_187644 NT_187670 NT_187675 NW_003571055
Consensus coding sequences : CCDS (NCBI)KIR3DS1
Cluster EST : UnigeneHs.743496 [ NCBI ]
CGAP (NCI)Hs.743496
Gene ExpressionKIR3DS1 [ NCBI-GEO ]   KIR3DS1 [ EBI - ARRAY_EXPRESS ]   KIR3DS1 [ SEEK ]   KIR3DS1 [ MEM ]
Gene Expression Viewer (FireBrowse)KIR3DS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3813
GTEX Portal (Tissue expression)KIR3DS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14943   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14943  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14943
Splice isoforms : SwissVarQ14943
PhosPhoSitePlusQ14943
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Immunoglobulin   
Domain families : Pfam (Sanger)ig (PF00047)   
Domain families : Pfam (NCBI)pfam00047   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)KIR3DS1
DMDM Disease mutations3813
Blocks (Seattle)KIR3DS1
SuperfamilyQ14943
Peptide AtlasQ14943
Protein Interaction databases
DIP (DOE-UCLA)Q14943
IntAct (EBI)Q14943
BioGRIDKIR3DS1
STRING (EMBL)KIR3DS1
ZODIACKIR3DS1
Ontologies - Pathways
QuickGOQ14943
Ontology : AmiGOplasma membrane  integral component of plasma membrane  immune response  signal transduction  natural killer cell activation  MHC class I receptor activity  innate immune response  
Ontology : EGO-EBIplasma membrane  integral component of plasma membrane  immune response  signal transduction  natural killer cell activation  MHC class I receptor activity  innate immune response  
NDEx NetworkKIR3DS1
Atlas of Cancer Signalling NetworkKIR3DS1
Wikipedia pathwaysKIR3DS1
Orthology - Evolution
OrthoDB3813
Phylogenetic Trees/Animal Genes : TreeFamKIR3DS1
HOVERGENQ14943
HOGENOMQ14943
Homologs : HomoloGeneKIR3DS1
Homology/Alignments : Family Browser (UCSC)KIR3DS1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIR3DS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIR3DS1
dbVarKIR3DS1
ClinVarKIR3DS1
1000_GenomesKIR3DS1 
Exome Variant ServerKIR3DS1
ExAC (Exome Aggregation Consortium)KIR3DS1 (select the gene name)
Genetic variants : HAPMAP3813
Genomic Variants (DGV)KIR3DS1 [DGVbeta]
DECIPHERKIR3DS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIR3DS1 
Mutations
ICGC Data PortalKIR3DS1 
TCGA Data PortalKIR3DS1 
Broad Tumor PortalKIR3DS1
OASIS PortalKIR3DS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDKIR3DS1
BioMutasearch KIR3DS1
DgiDB (Drug Gene Interaction Database)KIR3DS1
DoCM (Curated mutations)KIR3DS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIR3DS1 (select a term)
intoGenKIR3DS1
Cancer3DKIR3DS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIR3DS1
Genetic Testing Registry KIR3DS1
NextProtQ14943 [Medical]
TSGene3813
GENETestsKIR3DS1
Huge Navigator KIR3DS1 [HugePedia]
snp3D : Map Gene to Disease3813
BioCentury BCIQKIR3DS1
ClinGenKIR3DS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3813
Chemical/Pharm GKB GenePA30125
Clinical trialKIR3DS1
Miscellaneous
canSAR (ICR)KIR3DS1 (select the gene name)
Probes
Litterature
PubMed140 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIR3DS1
EVEXKIR3DS1
GoPubMedKIR3DS1
iHOPKIR3DS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:21:40 CEST 2017

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