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KIR3DX1 (killer cell immunoglobulin like receptor, three Ig domains X1)

Identity

Alias_namesLENG12
leukocyte receptor cluster (LRC) member 12
killer cell immunoglobulin-like receptor, three domains, X1
Alias_symbol (synonym)FLJ00060
Other aliasKIR3DL0
HGNC (Hugo) KIR3DX1
LocusID (NCBI) 90011
Atlas_Id 64936
Location 19_KI270938v1_alt  [Link to chromosome band 19]
Location_base_pair Starts at 517611 and ends at 528136 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/ZNA

 


External links

Nomenclature
HGNC (Hugo)KIR3DX1   25043
Cards
Entrez_Gene (NCBI)KIR3DX1  90011  killer cell immunoglobulin like receptor, three Ig domains X1
AliasesKIR3DL0; LENG12
GeneCards (Weizmann)KIR3DX1
Ensembl hg19 (Hinxton)ENSG00000104970 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104970 [Gene_View]  chr19_KI270938v1_alt:517611-528136 [Contig_View]  KIR3DX1 [Vega]
ICGC DataPortalENSG00000104970
TCGA cBioPortalKIR3DX1
AceView (NCBI)KIR3DX1
Genatlas (Paris)KIR3DX1
WikiGenes90011
SOURCE (Princeton)KIR3DX1
Genetics Home Reference (NIH)KIR3DX1
Genomic and cartography
GoldenPath hg38 (UCSC)KIR3DX1  -     chr19_KI270938v1_alt:517611-528136 +  19_KI270938v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIR3DX1  -     19_KI270938v1_alt   [Description]    (hg19-Feb_2009)
EnsemblKIR3DX1 - 19_KI270938v1_alt [CytoView hg19]  KIR3DX1 - 19_KI270938v1_alt [CytoView hg38]
Mapping of homologs : NCBIKIR3DX1 [Mapview hg19]  KIR3DX1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024467 BC033195 BC171827 BC171832 BC171834
RefSeq transcript (Entrez)NM_001047605 NM_033206
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_187693 NW_003571054 NW_003571060
Consensus coding sequences : CCDS (NCBI)KIR3DX1
Cluster EST : UnigeneHs.288520 [ NCBI ]
CGAP (NCI)Hs.288520
Alternative Splicing GalleryENSG00000104970
Gene ExpressionKIR3DX1 [ NCBI-GEO ]   KIR3DX1 [ EBI - ARRAY_EXPRESS ]   KIR3DX1 [ SEEK ]   KIR3DX1 [ MEM ]
Gene Expression Viewer (FireBrowse)KIR3DX1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90011
GTEX Portal (Tissue expression)KIR3DX1
Human Protein AtlasENSG00000104970-KIR3DX1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H7L2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H7L2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H7L2
Splice isoforms : SwissVarQ9H7L2
PhosPhoSitePlusQ9H7L2
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Immunoglobulin   
Domain families : Pfam (Sanger)ig (PF00047)   
Domain families : Pfam (NCBI)pfam00047   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)KIR3DX1
DMDM Disease mutations90011
Blocks (Seattle)KIR3DX1
SuperfamilyQ9H7L2
Human Protein Atlas [tissue]ENSG00000104970-KIR3DX1 [tissue]
Peptide AtlasQ9H7L2
HPRD13328
IPIIPI00853251   IPI00303320   IPI00892677   IPI00927146   IPI00927345   
Protein Interaction databases
DIP (DOE-UCLA)Q9H7L2
IntAct (EBI)Q9H7L2
FunCoupENSG00000104970
BioGRIDKIR3DX1
STRING (EMBL)KIR3DX1
ZODIACKIR3DX1
Ontologies - Pathways
QuickGOQ9H7L2
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkKIR3DX1
Atlas of Cancer Signalling NetworkKIR3DX1
Wikipedia pathwaysKIR3DX1
Orthology - Evolution
OrthoDB90011
GeneTree (enSembl)ENSG00000104970
Phylogenetic Trees/Animal Genes : TreeFamKIR3DX1
HOVERGENQ9H7L2
HOGENOMQ9H7L2
Homologs : HomoloGeneKIR3DX1
Homology/Alignments : Family Browser (UCSC)KIR3DX1
Gene fusions - Rearrangements
Tumor Fusion PortalKIR3DX1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIR3DX1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIR3DX1
dbVarKIR3DX1
ClinVarKIR3DX1
1000_GenomesKIR3DX1 
Exome Variant ServerKIR3DX1
ExAC (Exome Aggregation Consortium)ENSG00000104970
GNOMAD BrowserENSG00000104970
Genetic variants : HAPMAP90011
Genomic Variants (DGV)KIR3DX1 [DGVbeta]
DECIPHERKIR3DX1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIR3DX1 
Mutations
ICGC Data PortalKIR3DX1 
TCGA Data PortalKIR3DX1 
Broad Tumor PortalKIR3DX1
OASIS PortalKIR3DX1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIR3DX1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIR3DX1
BioMutasearch KIR3DX1
DgiDB (Drug Gene Interaction Database)KIR3DX1
DoCM (Curated mutations)KIR3DX1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIR3DX1 (select a term)
intoGenKIR3DX1
Cancer3DKIR3DX1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETKIR3DX1
MedgenKIR3DX1
Genetic Testing Registry KIR3DX1
NextProtQ9H7L2 [Medical]
TSGene90011
GENETestsKIR3DX1
Target ValidationKIR3DX1
Huge Navigator KIR3DX1 [HugePedia]
snp3D : Map Gene to Disease90011
BioCentury BCIQKIR3DX1
ClinGenKIR3DX1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90011
Chemical/Pharm GKB GenePA162393401
Clinical trialKIR3DX1
Miscellaneous
canSAR (ICR)KIR3DX1 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIR3DX1
EVEXKIR3DX1
GoPubMedKIR3DX1
iHOPKIR3DX1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:38:47 CET 2017

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