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KLF13 (Kruppel-like factor 13)

Identity

Other namesBTEB3
FKLF2
NSLP1
RFLAT-1
RFLAT1
HGNC (Hugo) KLF13
LocusID (NCBI) 51621
Location 15q13.3
Location_base_pair Starts at 31619083 and ends at 31670102 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)KLF13   13672
Cards
Entrez_Gene (NCBI)KLF13  51621  Kruppel-like factor 13
GeneCards (Weizmann)KLF13
Ensembl (Hinxton)ENSG00000169926 [Gene_View]  chr15:31619083-31670102 [Contig_View]  KLF13 [Vega]
ICGC DataPortalENSG00000169926
AceView (NCBI)KLF13
Genatlas (Paris)KLF13
WikiGenes51621
SOURCE (Princeton)NM_015995
Genomic and cartography
GoldenPath (UCSC)KLF13  -  15q13.3   chr15:31619083-31670102 +  15q13.3   [Description]    (hg19-Feb_2009)
EnsemblKLF13 - 15q13.3 [CytoView]
Mapping of homologs : NCBIKLF13 [Mapview]
OMIM605328   
Gene and transcription
Genbank (Entrez)AF132599 AF150628 AL390127 BC010438 BC012741
RefSeq transcript (Entrez)NM_015995
RefSeq genomic (Entrez)AC_000147 NC_000015 NC_018926 NT_010194 NT_187660 NW_001838206 NW_004929398
Consensus coding sequences : CCDS (NCBI)KLF13
Cluster EST : UnigeneHs.525752 [ NCBI ]
CGAP (NCI)Hs.525752
Alternative Splicing : Fast-db (Paris)GSHG0009726
Alternative Splicing GalleryENSG00000169926
Gene ExpressionKLF13 [ NCBI-GEO ]     KLF13 [ SEEK ]   KLF13 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2Y9 (Uniprot)
NextProtQ9Y2Y9  [Medical]
With graphics : InterProQ9Y2Y9
Splice isoforms : SwissVarQ9Y2Y9 (Swissvar)
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Related proteins : CluSTrQ9Y2Y9
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
DMDM Disease mutations51621
Blocks (Seattle)Q9Y2Y9
Human Protein AtlasENSG00000169926
Peptide AtlasQ9Y2Y9
HPRD05620
IPIIPI00219691   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2Y9
IntAct (EBI)Q9Y2Y9
FunCoupENSG00000169926
BioGRIDKLF13
IntegromeDBKLF13
STRING (EMBL)KLF13
Ontologies - Pathways
QuickGOQ9Y2Y9
Ontology : AmiGODNA binding  protein binding  nucleus  transcription from RNA polymerase II promoter  negative regulation of cell proliferation  negative regulation of erythrocyte differentiation  positive regulation of transcription from RNA polymerase II promoter  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription from RNA polymerase II promoter  negative regulation of cell proliferation  negative regulation of erythrocyte differentiation  positive regulation of transcription from RNA polymerase II promoter  metal ion binding  
Protein Interaction DatabaseKLF13
Wikipedia pathwaysKLF13
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)KLF13
SNP (GeneSNP Utah)KLF13
SNP : HGBaseKLF13
Genetic variants : HAPMAPKLF13
1000_GenomesKLF13 
ICGC programENSG00000169926 
CONAN: Copy Number AnalysisKLF13 
Somatic Mutations in Cancer : COSMICKLF13 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
DECIPHER (Syndromes)15:31619083-31670102
Mutations and Diseases : HGMDKLF13
OMIM605328   
MedgenKLF13
GENETestsKLF13
Disease Genetic AssociationKLF13
Huge Navigator KLF13 [HugePedia]  KLF13 [HugeCancerGEM]
Genomic VariantsKLF13  KLF13 [DGVbeta]
Exome VariantKLF13
dbVarKLF13
ClinVarKLF13
snp3D : Map Gene to Disease51621
General knowledge
Homologs : HomoloGeneKLF13
Homology/Alignments : Family Browser (UCSC)KLF13
Phylogenetic Trees/Animal Genes : TreeFamKLF13
Chemical/Protein Interactions : CTD51621
Chemical/Pharm GKB GenePA30133
Clinical trialKLF13
Cancer Resource (Charite)ENSG00000169926
Other databases
Probes
Litterature
PubMed32 Pubmed reference(s) in Entrez
CoreMineKLF13
GoPubMedKLF13
iHOPKLF13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Nov 8 17:36:05 CET 2014

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