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KLHDC10 (kelch domain containing 10)

Identity

Alias_symbol (synonym)KIAA0265
slim
Other alias
HGNC (Hugo) KLHDC10
LocusID (NCBI) 23008
Atlas_Id 64953
Location 7q32.2  [Link to chromosome band 7q32]
Location_base_pair Starts at 130070509 and ends at 130135720 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ELP4 (11p13) / KLHDC10 (7q32.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KLHDC10   22194
Cards
Entrez_Gene (NCBI)KLHDC10  23008  kelch domain containing 10
Aliasesslim
GeneCards (Weizmann)KLHDC10
Ensembl hg19 (Hinxton)ENSG00000128607 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000128607 [Gene_View]  chr7:130070509-130135720 [Contig_View]  KLHDC10 [Vega]
ICGC DataPortalENSG00000128607
TCGA cBioPortalKLHDC10
AceView (NCBI)KLHDC10
Genatlas (Paris)KLHDC10
WikiGenes23008
SOURCE (Princeton)KLHDC10
Genetics Home Reference (NIH)KLHDC10
Genomic and cartography
GoldenPath hg38 (UCSC)KLHDC10  -     chr7:130070509-130135720 +  7q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KLHDC10  -     7q32.2   [Description]    (hg19-Feb_2009)
EnsemblKLHDC10 - 7q32.2 [CytoView hg19]  KLHDC10 - 7q32.2 [CytoView hg38]
Mapping of homologs : NCBIKLHDC10 [Mapview hg19]  KLHDC10 [Mapview hg38]
OMIM615152   
Gene and transcription
Genbank (Entrez)AF277177 BC009977 BC036464 BC044884 D87454
RefSeq transcript (Entrez)NM_014997
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KLHDC10
Cluster EST : UnigeneHs.520710 [ NCBI ]
CGAP (NCI)Hs.520710
Alternative Splicing GalleryENSG00000128607
Gene ExpressionKLHDC10 [ NCBI-GEO ]   KLHDC10 [ EBI - ARRAY_EXPRESS ]   KLHDC10 [ SEEK ]   KLHDC10 [ MEM ]
Gene Expression Viewer (FireBrowse)KLHDC10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23008
GTEX Portal (Tissue expression)KLHDC10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6PID8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6PID8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6PID8
Splice isoforms : SwissVarQ6PID8
PhosPhoSitePlusQ6PID8
Domains : Interpro (EBI)Kelch-typ_b-propeller    Kelch_1   
Domain families : Pfam (Sanger)Kelch_1 (PF01344)   
Domain families : Pfam (NCBI)pfam01344   
Domain families : Smart (EMBL)Kelch (SM00612)  
Conserved Domain (NCBI)KLHDC10
DMDM Disease mutations23008
Blocks (Seattle)KLHDC10
SuperfamilyQ6PID8
Human Protein AtlasENSG00000128607
Peptide AtlasQ6PID8
HPRD17182
IPIIPI00384638   IPI00938168   IPI00947539   IPI00001896   IPI00947180   
Protein Interaction databases
DIP (DOE-UCLA)Q6PID8
IntAct (EBI)Q6PID8
FunCoupENSG00000128607
BioGRIDKLHDC10
STRING (EMBL)KLHDC10
ZODIACKLHDC10
Ontologies - Pathways
QuickGOQ6PID8
Ontology : AmiGOprotein binding  nucleoplasm  cytoplasm  
Ontology : EGO-EBIprotein binding  nucleoplasm  cytoplasm  
NDEx NetworkKLHDC10
Atlas of Cancer Signalling NetworkKLHDC10
Wikipedia pathwaysKLHDC10
Orthology - Evolution
OrthoDB23008
GeneTree (enSembl)ENSG00000128607
Phylogenetic Trees/Animal Genes : TreeFamKLHDC10
HOVERGENQ6PID8
HOGENOMQ6PID8
Homologs : HomoloGeneKLHDC10
Homology/Alignments : Family Browser (UCSC)KLHDC10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKLHDC10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KLHDC10
dbVarKLHDC10
ClinVarKLHDC10
1000_GenomesKLHDC10 
Exome Variant ServerKLHDC10
ExAC (Exome Aggregation Consortium)KLHDC10 (select the gene name)
Genetic variants : HAPMAP23008
Genomic Variants (DGV)KLHDC10 [DGVbeta]
DECIPHERKLHDC10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKLHDC10 
Mutations
ICGC Data PortalKLHDC10 
TCGA Data PortalKLHDC10 
Broad Tumor PortalKLHDC10
OASIS PortalKLHDC10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKLHDC10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKLHDC10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KLHDC10
DgiDB (Drug Gene Interaction Database)KLHDC10
DoCM (Curated mutations)KLHDC10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KLHDC10 (select a term)
intoGenKLHDC10
Cancer3DKLHDC10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615152   
Orphanet
MedgenKLHDC10
Genetic Testing Registry KLHDC10
NextProtQ6PID8 [Medical]
TSGene23008
GENETestsKLHDC10
Target ValidationKLHDC10
Huge Navigator KLHDC10 [HugePedia]
snp3D : Map Gene to Disease23008
BioCentury BCIQKLHDC10
ClinGenKLHDC10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23008
Chemical/Pharm GKB GenePA164721976
Clinical trialKLHDC10
Miscellaneous
canSAR (ICR)KLHDC10 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLHDC10
EVEXKLHDC10
GoPubMedKLHDC10
iHOPKLHDC10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:54:43 CEST 2017

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