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KLHDC7A (kelch domain containing 7A)

Identity

Alias_symbol (synonym)FLJ38753
Other alias-
HGNC (Hugo) KLHDC7A
LocusID (NCBI) 127707
Atlas_Id 64956
Location 1p36.13  [Link to chromosome band 1p36]
Location_base_pair Starts at 18480930 and ends at 18485986 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KLHDC7A   26791
Cards
Entrez_Gene (NCBI)KLHDC7A  127707  kelch domain containing 7A
Aliases
GeneCards (Weizmann)KLHDC7A
Ensembl hg19 (Hinxton)ENSG00000179023 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179023 [Gene_View]  chr1:18480930-18485986 [Contig_View]  KLHDC7A [Vega]
ICGC DataPortalENSG00000179023
TCGA cBioPortalKLHDC7A
AceView (NCBI)KLHDC7A
Genatlas (Paris)KLHDC7A
WikiGenes127707
SOURCE (Princeton)KLHDC7A
Genetics Home Reference (NIH)KLHDC7A
Genomic and cartography
GoldenPath hg38 (UCSC)KLHDC7A  -     chr1:18480930-18485986 +  1p36.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KLHDC7A  -     1p36.13   [Description]    (hg19-Feb_2009)
EnsemblKLHDC7A - 1p36.13 [CytoView hg19]  KLHDC7A - 1p36.13 [CytoView hg38]
Mapping of homologs : NCBIKLHDC7A [Mapview hg19]  KLHDC7A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056173 AK096072 BC101498 BC101500 BC151205
RefSeq transcript (Entrez)NM_152375
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KLHDC7A
Cluster EST : UnigeneHs.710799 [ NCBI ]
CGAP (NCI)Hs.710799
Alternative Splicing GalleryENSG00000179023
Gene ExpressionKLHDC7A [ NCBI-GEO ]   KLHDC7A [ EBI - ARRAY_EXPRESS ]   KLHDC7A [ SEEK ]   KLHDC7A [ MEM ]
Gene Expression Viewer (FireBrowse)KLHDC7A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)127707
GTEX Portal (Tissue expression)KLHDC7A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5VTJ3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5VTJ3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5VTJ3
Splice isoforms : SwissVarQ5VTJ3
PhosPhoSitePlusQ5VTJ3
Domains : Interpro (EBI)Kelch-typ_b-propeller    Kelch_1   
Domain families : Pfam (Sanger)Kelch_1 (PF01344)   
Domain families : Pfam (NCBI)pfam01344   
Domain families : Smart (EMBL)Kelch (SM00612)  
Conserved Domain (NCBI)KLHDC7A
DMDM Disease mutations127707
Blocks (Seattle)KLHDC7A
SuperfamilyQ5VTJ3
Human Protein AtlasENSG00000179023
Peptide AtlasQ5VTJ3
HPRD08246
IPIIPI00167617   IPI01013666   
Protein Interaction databases
DIP (DOE-UCLA)Q5VTJ3
IntAct (EBI)Q5VTJ3
FunCoupENSG00000179023
BioGRIDKLHDC7A
STRING (EMBL)KLHDC7A
ZODIACKLHDC7A
Ontologies - Pathways
QuickGOQ5VTJ3
Ontology : AmiGOubiquitin-protein transferase activity  integral component of membrane  protein ubiquitination  Cul3-RING ubiquitin ligase complex  
Ontology : EGO-EBIubiquitin-protein transferase activity  integral component of membrane  protein ubiquitination  Cul3-RING ubiquitin ligase complex  
NDEx NetworkKLHDC7A
Atlas of Cancer Signalling NetworkKLHDC7A
Wikipedia pathwaysKLHDC7A
Orthology - Evolution
OrthoDB127707
GeneTree (enSembl)ENSG00000179023
Phylogenetic Trees/Animal Genes : TreeFamKLHDC7A
HOVERGENQ5VTJ3
HOGENOMQ5VTJ3
Homologs : HomoloGeneKLHDC7A
Homology/Alignments : Family Browser (UCSC)KLHDC7A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKLHDC7A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KLHDC7A
dbVarKLHDC7A
ClinVarKLHDC7A
1000_GenomesKLHDC7A 
Exome Variant ServerKLHDC7A
ExAC (Exome Aggregation Consortium)KLHDC7A (select the gene name)
Genetic variants : HAPMAP127707
Genomic Variants (DGV)KLHDC7A [DGVbeta]
DECIPHERKLHDC7A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKLHDC7A 
Mutations
ICGC Data PortalKLHDC7A 
TCGA Data PortalKLHDC7A 
Broad Tumor PortalKLHDC7A
OASIS PortalKLHDC7A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKLHDC7A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKLHDC7A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KLHDC7A
DgiDB (Drug Gene Interaction Database)KLHDC7A
DoCM (Curated mutations)KLHDC7A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KLHDC7A (select a term)
intoGenKLHDC7A
Cancer3DKLHDC7A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKLHDC7A
Genetic Testing Registry KLHDC7A
NextProtQ5VTJ3 [Medical]
TSGene127707
GENETestsKLHDC7A
Target ValidationKLHDC7A
Huge Navigator KLHDC7A [HugePedia]
snp3D : Map Gene to Disease127707
BioCentury BCIQKLHDC7A
ClinGenKLHDC7A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD127707
Chemical/Pharm GKB GenePA142671581
Clinical trialKLHDC7A
Miscellaneous
canSAR (ICR)KLHDC7A (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLHDC7A
EVEXKLHDC7A
GoPubMedKLHDC7A
iHOPKLHDC7A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed Jun 7 15:54:44 CEST 2017

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