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KLHDC7B (kelch domain containing 7B)

Identity

Alias_symbol (synonym)MGC16635
Other alias-
HGNC (Hugo) KLHDC7B
LocusID (NCBI) 113730
Atlas_Id 52150
Location 22q13.33  [Link to chromosome band 22q13]
Location_base_pair Starts at 50548033 and ends at 50551023 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KLHDC7B   25145
Cards
Entrez_Gene (NCBI)KLHDC7B  113730  kelch domain containing 7B
Aliases
GeneCards (Weizmann)KLHDC7B
Ensembl hg19 (Hinxton)ENSG00000130487 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130487 [Gene_View]  chr22:50548033-50551023 [Contig_View]  KLHDC7B [Vega]
ICGC DataPortalENSG00000130487
TCGA cBioPortalKLHDC7B
AceView (NCBI)KLHDC7B
Genatlas (Paris)KLHDC7B
WikiGenes113730
SOURCE (Princeton)KLHDC7B
Genetics Home Reference (NIH)KLHDC7B
Genomic and cartography
GoldenPath hg38 (UCSC)KLHDC7B  -     chr22:50548033-50551023 +  22q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KLHDC7B  -     22q13.33   [Description]    (hg19-Feb_2009)
EnsemblKLHDC7B - 22q13.33 [CytoView hg19]  KLHDC7B - 22q13.33 [CytoView hg38]
Mapping of homologs : NCBIKLHDC7B [Mapview hg19]  KLHDC7B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC009980 CN479146
RefSeq transcript (Entrez)NM_138433
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KLHDC7B
Cluster EST : UnigeneHs.137007 [ NCBI ]
CGAP (NCI)Hs.137007
Alternative Splicing GalleryENSG00000130487
Gene ExpressionKLHDC7B [ NCBI-GEO ]   KLHDC7B [ EBI - ARRAY_EXPRESS ]   KLHDC7B [ SEEK ]   KLHDC7B [ MEM ]
Gene Expression Viewer (FireBrowse)KLHDC7B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)113730
GTEX Portal (Tissue expression)KLHDC7B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96G42   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96G42  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96G42
Splice isoforms : SwissVarQ96G42
PhosPhoSitePlusQ96G42
Domains : Interpro (EBI)Kelch-typ_b-propeller    Kelch_1   
Domain families : Pfam (Sanger)Kelch_1 (PF01344)   
Domain families : Pfam (NCBI)pfam01344   
Domain families : Smart (EMBL)Kelch (SM00612)  
Conserved Domain (NCBI)KLHDC7B
DMDM Disease mutations113730
Blocks (Seattle)KLHDC7B
SuperfamilyQ96G42
Human Protein AtlasENSG00000130487
Peptide AtlasQ96G42
HPRD14453
IPIIPI00062237   
Protein Interaction databases
DIP (DOE-UCLA)Q96G42
IntAct (EBI)Q96G42
FunCoupENSG00000130487
BioGRIDKLHDC7B
STRING (EMBL)KLHDC7B
ZODIACKLHDC7B
Ontologies - Pathways
QuickGOQ96G42
Ontology : AmiGOubiquitin-protein transferase activity  protein ubiquitination  Cul3-RING ubiquitin ligase complex  
Ontology : EGO-EBIubiquitin-protein transferase activity  protein ubiquitination  Cul3-RING ubiquitin ligase complex  
NDEx NetworkKLHDC7B
Atlas of Cancer Signalling NetworkKLHDC7B
Wikipedia pathwaysKLHDC7B
Orthology - Evolution
OrthoDB113730
GeneTree (enSembl)ENSG00000130487
Phylogenetic Trees/Animal Genes : TreeFamKLHDC7B
HOVERGENQ96G42
HOGENOMQ96G42
Homologs : HomoloGeneKLHDC7B
Homology/Alignments : Family Browser (UCSC)KLHDC7B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKLHDC7B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KLHDC7B
dbVarKLHDC7B
ClinVarKLHDC7B
1000_GenomesKLHDC7B 
Exome Variant ServerKLHDC7B
ExAC (Exome Aggregation Consortium)KLHDC7B (select the gene name)
Genetic variants : HAPMAP113730
Genomic Variants (DGV)KLHDC7B [DGVbeta]
DECIPHERKLHDC7B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKLHDC7B 
Mutations
ICGC Data PortalKLHDC7B 
TCGA Data PortalKLHDC7B 
Broad Tumor PortalKLHDC7B
OASIS PortalKLHDC7B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKLHDC7B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKLHDC7B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KLHDC7B
DgiDB (Drug Gene Interaction Database)KLHDC7B
DoCM (Curated mutations)KLHDC7B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KLHDC7B (select a term)
intoGenKLHDC7B
Cancer3DKLHDC7B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKLHDC7B
Genetic Testing Registry KLHDC7B
NextProtQ96G42 [Medical]
TSGene113730
GENETestsKLHDC7B
Target ValidationKLHDC7B
Huge Navigator KLHDC7B [HugePedia]
snp3D : Map Gene to Disease113730
BioCentury BCIQKLHDC7B
ClinGenKLHDC7B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD113730
Chemical/Pharm GKB GenePA142671582
Clinical trialKLHDC7B
Miscellaneous
canSAR (ICR)KLHDC7B (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLHDC7B
EVEXKLHDC7B
GoPubMedKLHDC7B
iHOPKLHDC7B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:39:46 CEST 2017

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