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KLHL11 (kelch-like family member 11)

Identity

Alias_nameskelch-like 11 (Drosophila)
Alias_symbol (synonym)FLJ10572
Other alias-
HGNC (Hugo) KLHL11
LocusID (NCBI) 55175
Atlas_Id 64959
Location 17q21.2  [Link to chromosome band 17q21]
Location_base_pair Starts at 40004771 and ends at 40021684 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KLHL11   19008
Cards
Entrez_Gene (NCBI)KLHL11  55175  kelch-like family member 11
Aliases
GeneCards (Weizmann)KLHL11
Ensembl hg19 (Hinxton) [Gene_View]  chr17:40004771-40021684 [Contig_View]  KLHL11 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:40004771-40021684 [Contig_View]  KLHL11 [Vega]
TCGA cBioPortalKLHL11
AceView (NCBI)KLHL11
Genatlas (Paris)KLHL11
WikiGenes55175
SOURCE (Princeton)KLHL11
Genetics Home Reference (NIH)KLHL11
Genomic and cartography
GoldenPath hg19 (UCSC)KLHL11  -     chr17:40004771-40021684 -  17q21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KLHL11  -     17q21.2   [Description]    (hg38-Dec_2013)
EnsemblKLHL11 - 17q21.2 [CytoView hg19]  KLHL11 - 17q21.2 [CytoView hg38]
Mapping of homologs : NCBIKLHL11 [Mapview hg19]  KLHL11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001434 AK096415 AK301952 BC034470 BC040976
RefSeq transcript (Entrez)NM_018143
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)KLHL11
Cluster EST : UnigeneHs.592134 [ NCBI ]
CGAP (NCI)Hs.592134
Gene ExpressionKLHL11 [ NCBI-GEO ]   KLHL11 [ EBI - ARRAY_EXPRESS ]   KLHL11 [ SEEK ]   KLHL11 [ MEM ]
Gene Expression Viewer (FireBrowse)KLHL11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55175
GTEX Portal (Tissue expression)KLHL11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NVR0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NVR0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NVR0
Splice isoforms : SwissVarQ9NVR0
PhosPhoSitePlusQ9NVR0
Domaine pattern : Prosite (Expaxy)BTB (PS50097)   
Domains : Interpro (EBI)BACK    BTB/POZ-like    BTB/POZ_fold    BTB_POZ    Kelch-typ_b-propeller    Kelch_1   
Domain families : Pfam (Sanger)BACK (PF07707)    BTB (PF00651)    Kelch_1 (PF01344)   
Domain families : Pfam (NCBI)pfam07707    pfam00651    pfam01344   
Domain families : Smart (EMBL)BACK (SM00875)  BTB (SM00225)  Kelch (SM00612)  
Conserved Domain (NCBI)KLHL11
DMDM Disease mutations55175
Blocks (Seattle)KLHL11
PDB (SRS)3I3N    4AP2    4APF   
PDB (PDBSum)3I3N    4AP2    4APF   
PDB (IMB)3I3N    4AP2    4APF   
PDB (RSDB)3I3N    4AP2    4APF   
Structural Biology KnowledgeBase3I3N    4AP2    4APF   
SCOP (Structural Classification of Proteins)3I3N    4AP2    4APF   
CATH (Classification of proteins structures)3I3N    4AP2    4APF   
SuperfamilyQ9NVR0
Peptide AtlasQ9NVR0
HPRD13924
IPIIPI00018726   IPI01013849   
Protein Interaction databases
DIP (DOE-UCLA)Q9NVR0
IntAct (EBI)Q9NVR0
BioGRIDKLHL11
STRING (EMBL)KLHL11
ZODIACKLHL11
Ontologies - Pathways
QuickGOQ9NVR0
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkKLHL11
Atlas of Cancer Signalling NetworkKLHL11
Wikipedia pathwaysKLHL11
Orthology - Evolution
OrthoDB55175
Phylogenetic Trees/Animal Genes : TreeFamKLHL11
HOVERGENQ9NVR0
HOGENOMQ9NVR0
Homologs : HomoloGeneKLHL11
Homology/Alignments : Family Browser (UCSC)KLHL11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKLHL11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KLHL11
dbVarKLHL11
ClinVarKLHL11
1000_GenomesKLHL11 
Exome Variant ServerKLHL11
ExAC (Exome Aggregation Consortium)KLHL11 (select the gene name)
Genetic variants : HAPMAP55175
Genomic Variants (DGV)KLHL11 [DGVbeta]
DECIPHER (Syndromes)17:40004771-40021684  
CONAN: Copy Number AnalysisKLHL11 
Mutations
ICGC Data PortalKLHL11 
TCGA Data PortalKLHL11 
Broad Tumor PortalKLHL11
OASIS PortalKLHL11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKLHL11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKLHL11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KLHL11
DgiDB (Drug Gene Interaction Database)KLHL11
DoCM (Curated mutations)KLHL11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KLHL11 (select a term)
intoGenKLHL11
Cancer3DKLHL11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKLHL11
Genetic Testing Registry KLHL11
NextProtQ9NVR0 [Medical]
TSGene55175
GENETestsKLHL11
Huge Navigator KLHL11 [HugePedia]
snp3D : Map Gene to Disease55175
BioCentury BCIQKLHL11
ClinGenKLHL11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55175
Chemical/Pharm GKB GenePA38777
Clinical trialKLHL11
Miscellaneous
canSAR (ICR)KLHL11 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLHL11
EVEXKLHL11
GoPubMedKLHL11
iHOPKLHL11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:09:59 CET 2017

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