Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KLHL26 (kelch-like family member 26)

Identity

Alias_nameskelch-like 26 (Drosophila)
Other alias-
HGNC (Hugo) KLHL26
LocusID (NCBI) 55295
Atlas_Id 64970
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 18747838 and ends at 18781302 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CRTC1 (19p13.11) / KLHL26 (19p13.11)KLHL26 (19p13.11) / KXD1 (19p13.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KLHL26   25623
Cards
Entrez_Gene (NCBI)KLHL26  55295  kelch-like family member 26
Aliases
GeneCards (Weizmann)KLHL26
Ensembl hg19 (Hinxton) [Gene_View]  chr19:18747838-18781302 [Contig_View]  KLHL26 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:18747838-18781302 [Contig_View]  KLHL26 [Vega]
TCGA cBioPortalKLHL26
AceView (NCBI)KLHL26
Genatlas (Paris)KLHL26
WikiGenes55295
SOURCE (Princeton)KLHL26
Genetics Home Reference (NIH)KLHL26
Genomic and cartography
GoldenPath hg19 (UCSC)KLHL26  -     chr19:18747838-18781302 +  19p13.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KLHL26  -     19p13.11   [Description]    (hg38-Dec_2013)
EnsemblKLHL26 - 19p13.11 [CytoView hg19]  KLHL26 - 19p13.11 [CytoView hg38]
Mapping of homologs : NCBIKLHL26 [Mapview hg19]  KLHL26 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001940 AK222656 AK294074 BC026319 JF432514
RefSeq transcript (Entrez)NM_018316
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)KLHL26
Cluster EST : UnigeneHs.250632 [ NCBI ]
CGAP (NCI)Hs.250632
Gene ExpressionKLHL26 [ NCBI-GEO ]   KLHL26 [ EBI - ARRAY_EXPRESS ]   KLHL26 [ SEEK ]   KLHL26 [ MEM ]
Gene Expression Viewer (FireBrowse)KLHL26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55295
GTEX Portal (Tissue expression)KLHL26
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ53HC5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ53HC5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ53HC5
Splice isoforms : SwissVarQ53HC5
PhosPhoSitePlusQ53HC5
Domaine pattern : Prosite (Expaxy)BTB (PS50097)   
Domains : Interpro (EBI)BACK    BTB-kelch_protein    BTB/POZ-like    BTB/POZ_fold    BTB_POZ    Gal_Oxidase_b-propeller    Kelch_1    KLHL26   
Domain families : Pfam (Sanger)BACK (PF07707)    BTB (PF00651)    Kelch_1 (PF01344)   
Domain families : Pfam (NCBI)pfam07707    pfam00651    pfam01344   
Domain families : Smart (EMBL)BACK (SM00875)  BTB (SM00225)  Kelch (SM00612)  
Conserved Domain (NCBI)KLHL26
DMDM Disease mutations55295
Blocks (Seattle)KLHL26
SuperfamilyQ53HC5
Peptide AtlasQ53HC5
HPRD07728
IPIIPI00550998   IPI00910874   
Protein Interaction databases
DIP (DOE-UCLA)Q53HC5
IntAct (EBI)Q53HC5
BioGRIDKLHL26
STRING (EMBL)KLHL26
ZODIACKLHL26
Ontologies - Pathways
QuickGOQ53HC5
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkKLHL26
Atlas of Cancer Signalling NetworkKLHL26
Wikipedia pathwaysKLHL26
Orthology - Evolution
OrthoDB55295
Phylogenetic Trees/Animal Genes : TreeFamKLHL26
HOVERGENQ53HC5
HOGENOMQ53HC5
Homologs : HomoloGeneKLHL26
Homology/Alignments : Family Browser (UCSC)KLHL26
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKLHL26 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KLHL26
dbVarKLHL26
ClinVarKLHL26
1000_GenomesKLHL26 
Exome Variant ServerKLHL26
ExAC (Exome Aggregation Consortium)KLHL26 (select the gene name)
Genetic variants : HAPMAP55295
Genomic Variants (DGV)KLHL26 [DGVbeta]
DECIPHER (Syndromes)19:18747838-18781302  
CONAN: Copy Number AnalysisKLHL26 
Mutations
ICGC Data PortalKLHL26 
TCGA Data PortalKLHL26 
Broad Tumor PortalKLHL26
OASIS PortalKLHL26 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKLHL26  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKLHL26
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KLHL26
DgiDB (Drug Gene Interaction Database)KLHL26
DoCM (Curated mutations)KLHL26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KLHL26 (select a term)
intoGenKLHL26
Cancer3DKLHL26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKLHL26
Genetic Testing Registry KLHL26
NextProtQ53HC5 [Medical]
TSGene55295
GENETestsKLHL26
Huge Navigator KLHL26 [HugePedia]
snp3D : Map Gene to Disease55295
BioCentury BCIQKLHL26
ClinGenKLHL26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55295
Chemical/Pharm GKB GenePA143485524
Clinical trialKLHL26
Miscellaneous
canSAR (ICR)KLHL26 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLHL26
EVEXKLHL26
GoPubMedKLHL26
iHOPKLHL26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:10:01 CET 2017

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