Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

KLHL33 (kelch like family member 33)

Identity

Alias_nameskelch-like 33 (Drosophila)
Other alias-
HGNC (Hugo) KLHL33
LocusID (NCBI) 123103
Atlas_Id 64976
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20428811 and ends at 20435642 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KLHL33   31952
Cards
Entrez_Gene (NCBI)KLHL33  123103  kelch like family member 33
Aliases
GeneCards (Weizmann)KLHL33
Ensembl hg19 (Hinxton)ENSG00000185271 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185271 [Gene_View]  chr14:20428811-20435642 [Contig_View]  KLHL33 [Vega]
ICGC DataPortalENSG00000185271
TCGA cBioPortalKLHL33
AceView (NCBI)KLHL33
Genatlas (Paris)KLHL33
WikiGenes123103
SOURCE (Princeton)KLHL33
Genetics Home Reference (NIH)KLHL33
Genomic and cartography
GoldenPath hg38 (UCSC)KLHL33  -     chr14:20428811-20435642 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KLHL33  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblKLHL33 - 14q11.2 [CytoView hg19]  KLHL33 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIKLHL33 [Mapview hg19]  KLHL33 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC146951 BC146954 BC151130 BY797694
RefSeq transcript (Entrez)NM_001109997
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KLHL33
Cluster EST : UnigeneHs.556014 [ NCBI ]
CGAP (NCI)Hs.556014
Alternative Splicing GalleryENSG00000185271
Gene ExpressionKLHL33 [ NCBI-GEO ]   KLHL33 [ EBI - ARRAY_EXPRESS ]   KLHL33 [ SEEK ]   KLHL33 [ MEM ]
Gene Expression Viewer (FireBrowse)KLHL33 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)123103
GTEX Portal (Tissue expression)KLHL33
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NCF5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NCF5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NCF5
Splice isoforms : SwissVarA6NCF5
PhosPhoSitePlusA6NCF5
Domains : Interpro (EBI)BACK    BTB-kelch_protein    Kelch-typ_b-propeller    Kelch_1    KLHL33    SKP1/BTB/POZ   
Domain families : Pfam (Sanger)BACK (PF07707)    Kelch_1 (PF01344)   
Domain families : Pfam (NCBI)pfam07707    pfam01344   
Domain families : Smart (EMBL)BACK (SM00875)  Kelch (SM00612)  
Conserved Domain (NCBI)KLHL33
DMDM Disease mutations123103
Blocks (Seattle)KLHL33
SuperfamilyA6NCF5
Human Protein AtlasENSG00000185271
Peptide AtlasA6NCF5
IPIIPI00887935   
Protein Interaction databases
DIP (DOE-UCLA)A6NCF5
IntAct (EBI)A6NCF5
FunCoupENSG00000185271
BioGRIDKLHL33
STRING (EMBL)KLHL33
ZODIACKLHL33
Ontologies - Pathways
QuickGOA6NCF5
Ontology : AmiGOubiquitin-protein transferase activity  protein ubiquitination  Cul3-RING ubiquitin ligase complex  
Ontology : EGO-EBIubiquitin-protein transferase activity  protein ubiquitination  Cul3-RING ubiquitin ligase complex  
NDEx NetworkKLHL33
Atlas of Cancer Signalling NetworkKLHL33
Wikipedia pathwaysKLHL33
Orthology - Evolution
OrthoDB123103
GeneTree (enSembl)ENSG00000185271
Phylogenetic Trees/Animal Genes : TreeFamKLHL33
HOVERGENA6NCF5
HOGENOMA6NCF5
Homologs : HomoloGeneKLHL33
Homology/Alignments : Family Browser (UCSC)KLHL33
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKLHL33 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KLHL33
dbVarKLHL33
ClinVarKLHL33
1000_GenomesKLHL33 
Exome Variant ServerKLHL33
ExAC (Exome Aggregation Consortium)KLHL33 (select the gene name)
Genetic variants : HAPMAP123103
Genomic Variants (DGV)KLHL33 [DGVbeta]
DECIPHERKLHL33 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKLHL33 
Mutations
ICGC Data PortalKLHL33 
TCGA Data PortalKLHL33 
Broad Tumor PortalKLHL33
OASIS PortalKLHL33 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKLHL33  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKLHL33
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KLHL33
DgiDB (Drug Gene Interaction Database)KLHL33
DoCM (Curated mutations)KLHL33 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KLHL33 (select a term)
intoGenKLHL33
Cancer3DKLHL33(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKLHL33
Genetic Testing Registry KLHL33
NextProtA6NCF5 [Medical]
TSGene123103
GENETestsKLHL33
Target ValidationKLHL33
Huge Navigator KLHL33 [HugePedia]
snp3D : Map Gene to Disease123103
BioCentury BCIQKLHL33
ClinGenKLHL33
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD123103
Chemical/Pharm GKB GenePA162393579
Clinical trialKLHL33
Miscellaneous
canSAR (ICR)KLHL33 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLHL33
EVEXKLHL33
GoPubMedKLHL33
iHOPKLHL33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:12:03 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.