Atlas of Genetics and Cytogenetics in Oncology and Haematology

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KLHL36 (kelch like family member 36)

Identity

Alias_namesC16orf44
chromosome 16 open reading frame 44
kelch-like 36 (Drosophila)
Alias_symbol (synonym)FLJ12543
Other alias
HGNC (Hugo) KLHL36
LocusID (NCBI) 79786
Atlas_Id 64979
Location 16q24.1  [Link to chromosome band 16q24]
Location_base_pair Starts at 84648511 and ends at 84667686 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)KLHL36   17844
Cards
Entrez_Gene (NCBI)KLHL36  79786  kelch like family member 36
AliasesC16orf44
GeneCards (Weizmann)KLHL36
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr16:84648511-84667686 [Contig_View]  KLHL36 [Vega]
TCGA cBioPortalKLHL36
AceView (NCBI)KLHL36
Genatlas (Paris)KLHL36
WikiGenes79786
SOURCE (Princeton)KLHL36
Genetics Home Reference (NIH)KLHL36
Genomic and cartography
GoldenPath hg38 (UCSC)KLHL36  -     chr16:84648511-84667686 +  16q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KLHL36  -     16q24.1   [Description]    (hg19-Feb_2009)
EnsemblKLHL36 - 16q24.1 [CytoView hg19]  KLHL36 - 16q24.1 [CytoView hg38]
Mapping of homologs : NCBIKLHL36 [Mapview hg19]  KLHL36 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022605 AK056197 AK056428 AK074056 AK122745
RefSeq transcript (Entrez)NM_001303451 NM_024731
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KLHL36
Cluster EST : UnigeneHs.578546 [ NCBI ]
CGAP (NCI)Hs.578546
Gene ExpressionKLHL36 [ NCBI-GEO ]   KLHL36 [ EBI - ARRAY_EXPRESS ]   KLHL36 [ SEEK ]   KLHL36 [ MEM ]
Gene Expression Viewer (FireBrowse)KLHL36 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79786
GTEX Portal (Tissue expression)KLHL36
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N4N3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N4N3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N4N3
Splice isoforms : SwissVarQ8N4N3
PhosPhoSitePlusQ8N4N3
Domaine pattern : Prosite (Expaxy)BTB (PS50097)   
Domains : Interpro (EBI)BACK    BTB-kelch_protein    BTB/POZ_dom    Gal_Oxidase_b-propeller    Kelch_1    KLHL36    SKP1/BTB/POZ   
Domain families : Pfam (Sanger)BACK (PF07707)    BTB (PF00651)    Kelch_1 (PF01344)   
Domain families : Pfam (NCBI)pfam07707    pfam00651    pfam01344   
Domain families : Smart (EMBL)BACK (SM00875)  BTB (SM00225)  Kelch (SM00612)  
Conserved Domain (NCBI)KLHL36
DMDM Disease mutations79786
Blocks (Seattle)KLHL36
SuperfamilyQ8N4N3
Peptide AtlasQ8N4N3
HPRD12675
IPIIPI00296724   IPI00166852   IPI00383090   
Protein Interaction databases
DIP (DOE-UCLA)Q8N4N3
IntAct (EBI)Q8N4N3
BioGRIDKLHL36
STRING (EMBL)KLHL36
ZODIACKLHL36
Ontologies - Pathways
QuickGOQ8N4N3
Ontology : AmiGOubiquitin-protein transferase activity  protein ubiquitination  Cul3-RING ubiquitin ligase complex  
Ontology : EGO-EBIubiquitin-protein transferase activity  protein ubiquitination  Cul3-RING ubiquitin ligase complex  
NDEx NetworkKLHL36
Atlas of Cancer Signalling NetworkKLHL36
Wikipedia pathwaysKLHL36
Orthology - Evolution
OrthoDB79786
Phylogenetic Trees/Animal Genes : TreeFamKLHL36
HOVERGENQ8N4N3
HOGENOMQ8N4N3
Homologs : HomoloGeneKLHL36
Homology/Alignments : Family Browser (UCSC)KLHL36
Gene fusions - Rearrangements
Fusion : QuiverKLHL36
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKLHL36 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KLHL36
dbVarKLHL36
ClinVarKLHL36
1000_GenomesKLHL36 
Exome Variant ServerKLHL36
Varsome BrowserKLHL36
Genetic variants : HAPMAP79786
Genomic Variants (DGV)KLHL36 [DGVbeta]
DECIPHERKLHL36 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKLHL36 
Mutations
ICGC Data PortalKLHL36 
TCGA Data PortalKLHL36 
Broad Tumor PortalKLHL36
OASIS PortalKLHL36 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKLHL36  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKLHL36
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KLHL36
DgiDB (Drug Gene Interaction Database)KLHL36
DoCM (Curated mutations)KLHL36 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KLHL36 (select a term)
intoGenKLHL36
Cancer3DKLHL36(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETKLHL36
MedgenKLHL36
Genetic Testing Registry KLHL36
NextProtQ8N4N3 [Medical]
TSGene79786
GENETestsKLHL36
Target ValidationKLHL36
Huge Navigator KLHL36 [HugePedia]
snp3D : Map Gene to Disease79786
BioCentury BCIQKLHL36
ClinGenKLHL36
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79786
Chemical/Pharm GKB GenePA162393612
Clinical trialKLHL36
Miscellaneous
canSAR (ICR)KLHL36 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLHL36
EVEXKLHL36
GoPubMedKLHL36
iHOPKLHL36
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:51:12 CEST 2018
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