Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KLHL6-AS1 (KLHL6 antisense RNA 1)

Identity

Alias_namesKLHL6 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) KLHL6-AS1
LocusID (NCBI) 100874019
Atlas_Id 64985
Location 3q27.1  [Link to chromosome band 3q27]
Location_base_pair Starts at 183548735 and ends at 183552326 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KLHL6-AS1   40850
Cards
Entrez_Gene (NCBI)KLHL6-AS1  100874019  KLHL6 antisense RNA 1
Aliases
GeneCards (Weizmann)KLHL6-AS1
Ensembl hg19 (Hinxton)ENSG00000242522 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242522 [Gene_View]  chr3:183548735-183552326 [Contig_View]  KLHL6-AS1 [Vega]
ICGC DataPortalENSG00000242522
TCGA cBioPortalKLHL6-AS1
AceView (NCBI)KLHL6-AS1
Genatlas (Paris)KLHL6-AS1
WikiGenes100874019
SOURCE (Princeton)KLHL6-AS1
Genetics Home Reference (NIH)KLHL6-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)KLHL6-AS1  -     chr3:183548735-183552326 +  3q27.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KLHL6-AS1  -     3q27.1   [Description]    (hg19-Feb_2009)
EnsemblKLHL6-AS1 - 3q27.1 [CytoView hg19]  KLHL6-AS1 - 3q27.1 [CytoView hg38]
Mapping of homologs : NCBIKLHL6-AS1 [Mapview hg19]  KLHL6-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX091913
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KLHL6-AS1
Alternative Splicing GalleryENSG00000242522
Gene ExpressionKLHL6-AS1 [ NCBI-GEO ]   KLHL6-AS1 [ EBI - ARRAY_EXPRESS ]   KLHL6-AS1 [ SEEK ]   KLHL6-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)KLHL6-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874019
GTEX Portal (Tissue expression)KLHL6-AS1
Human Protein AtlasENSG00000242522-KLHL6-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KLHL6-AS1
DMDM Disease mutations100874019
Blocks (Seattle)KLHL6-AS1
Human Protein Atlas [tissue]ENSG00000242522-KLHL6-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000242522
BioGRIDKLHL6-AS1
STRING (EMBL)KLHL6-AS1
ZODIACKLHL6-AS1
Ontologies - Pathways
Huge Navigator KLHL6-AS1 [HugePedia]
snp3D : Map Gene to Disease100874019
BioCentury BCIQKLHL6-AS1
ClinGenKLHL6-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874019
Clinical trialKLHL6-AS1
Miscellaneous
canSAR (ICR)KLHL6-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLHL6-AS1
EVEXKLHL6-AS1
GoPubMedKLHL6-AS1
iHOPKLHL6-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:07:46 CET 2017

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