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KLHL7 (kelch-like family member 7)

Identity

Other namesKLHL6
SBBI26
HGNC (Hugo) KLHL7
LocusID (NCBI) 55975
Location 7p15.3
Location_base_pair Starts at 23145353 and ends at 23215038 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)KLHL7   15646
Cards
Entrez_Gene (NCBI)KLHL7  55975  kelch-like family member 7
GeneCards (Weizmann)KLHL7
Ensembl (Hinxton)ENSG00000122550 [Gene_View]  chr7:23145353-23215038 [Contig_View]  KLHL7 [Vega]
ICGC DataPortalENSG00000122550
AceView (NCBI)KLHL7
Genatlas (Paris)KLHL7
WikiGenes55975
SOURCE (Princeton)NM_001031710 NM_001172428 NM_018846
Genomic and cartography
GoldenPath (UCSC)KLHL7  -  7p15.3   chr7:23145353-23215038 +  7p15.3   [Description]    (hg19-Feb_2009)
EnsemblKLHL7 - 7p15.3 [CytoView]
Mapping of homologs : NCBIKLHL7 [Mapview]
OMIM611119   612943   
Gene and transcription
Genbank (Entrez)AA432360 AF111113 AK056390 AK290479 AK296219
RefSeq transcript (Entrez)NM_001031710 NM_001172428 NM_018846
RefSeq genomic (Entrez)AC_000139 NC_000007 NC_018918 NG_016983 NT_007819 NW_001839003 NW_004929329
Consensus coding sequences : CCDS (NCBI)KLHL7
Cluster EST : UnigeneHs.654817 [ NCBI ]
CGAP (NCI)Hs.654817
Alternative Splicing : Fast-db (Paris)GSHG0027200
Alternative Splicing GalleryENSG00000122550
Gene ExpressionKLHL7 [ NCBI-GEO ]     KLHL7 [ SEEK ]   KLHL7 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IXQ5 (Uniprot)
NextProtQ8IXQ5  [Medical]
With graphics : InterProQ8IXQ5
Splice isoforms : SwissVarQ8IXQ5 (Swissvar)
Domaine pattern : Prosite (Expaxy)BTB (PS50097)   
Domains : Interpro (EBI)BACK    BTB/POZ-like    BTB/POZ_fold    BTB_POZ    Kelch-like_gigaxonin-typ    Kelch-typ_b-propeller    Kelch_1   
Related proteins : CluSTrQ8IXQ5
Domain families : Pfam (Sanger)BACK (PF07707)    BTB (PF00651)    Kelch_1 (PF01344)   
Domain families : Pfam (NCBI)pfam07707    pfam00651    pfam01344   
Domain families : Smart (EMBL)BACK (SM00875)  BTB (SM00225)  Kelch (SM00612)  
DMDM Disease mutations55975
Blocks (Seattle)Q8IXQ5
PDB (SRS)3II7   
PDB (PDBSum)3II7   
PDB (IMB)3II7   
PDB (RSDB)3II7   
Human Protein AtlasENSG00000122550
Peptide AtlasQ8IXQ5
HPRD13927
IPIIPI00186843   IPI00643493   IPI00001423   IPI00385471   IPI01012404   IPI01013619   IPI00941076   IPI01018899   IPI00982116   IPI00917818   IPI00916573   
Protein Interaction databases
DIP (DOE-UCLA)Q8IXQ5
IntAct (EBI)Q8IXQ5
FunCoupENSG00000122550
BioGRIDKLHL7
IntegromeDBKLHL7
STRING (EMBL)KLHL7
Ontologies - Pathways
QuickGOQ8IXQ5
Ontology : AmiGOnucleus  nucleolus  nucleolus  cytoplasm  plasma membrane  protein ubiquitination  protein ubiquitination  Cul3-RING ubiquitin ligase complex  protein homodimerization activity  
Ontology : EGO-EBInucleus  nucleolus  nucleolus  cytoplasm  plasma membrane  protein ubiquitination  protein ubiquitination  Cul3-RING ubiquitin ligase complex  protein homodimerization activity  
Protein Interaction DatabaseKLHL7
Wikipedia pathwaysKLHL7
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)KLHL7
SNP (GeneSNP Utah)KLHL7
SNP : HGBaseKLHL7
Genetic variants : HAPMAPKLHL7
1000_GenomesKLHL7 
ICGC programENSG00000122550 
CONAN: Copy Number AnalysisKLHL7 
Somatic Mutations in Cancer : COSMICKLHL7 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Eye diseases - LOVD
DECIPHER (Syndromes)7:23145353-23215038
Mutations and Diseases : HGMDKLHL7
OMIM611119    612943   
MedgenKLHL7
GENETestsKLHL7
Disease Genetic AssociationKLHL7
Huge Navigator KLHL7 [HugePedia]  KLHL7 [HugeCancerGEM]
Genomic VariantsKLHL7  KLHL7 [DGVbeta]
Exome VariantKLHL7
dbVarKLHL7
ClinVarKLHL7
snp3D : Map Gene to Disease55975
General knowledge
Homologs : HomoloGeneKLHL7
Homology/Alignments : Family Browser (UCSC)KLHL7
Phylogenetic Trees/Animal Genes : TreeFamKLHL7
Chemical/Protein Interactions : CTD55975
Chemical/Pharm GKB GenePA38392
Clinical trialKLHL7
Cancer Resource (Charite)ENSG00000122550
Other databases
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
CoreMineKLHL7
GoPubMedKLHL7
iHOPKLHL7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Nov 8 17:36:12 CET 2014

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