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KLHL9 (kelch like family member 9)

Identity

Alias_nameskelch-like 9 (Drosophila)
Alias_symbol (synonym)KIAA1354
FLJ13568
Other alias-
HGNC (Hugo) KLHL9
LocusID (NCBI) 55958
Atlas_Id 64987
Location 9p21.3  [Link to chromosome band 9p21]
Location_base_pair Starts at 21329671 and ends at 21335432 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KLHL9   18732
Cards
Entrez_Gene (NCBI)KLHL9  55958  kelch like family member 9
Aliases
GeneCards (Weizmann)KLHL9
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:21329671-21335432 [Contig_View]  KLHL9 [Vega]
TCGA cBioPortalKLHL9
AceView (NCBI)KLHL9
Genatlas (Paris)KLHL9
WikiGenes55958
SOURCE (Princeton)KLHL9
Genetics Home Reference (NIH)KLHL9
Genomic and cartography
GoldenPath hg38 (UCSC)KLHL9  -     chr9:21329671-21335432 -  9p21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KLHL9  -     9p21.3   [Description]    (hg19-Feb_2009)
EnsemblKLHL9 - 9p21.3 [CytoView hg19]  KLHL9 - 9p21.3 [CytoView hg38]
Mapping of homologs : NCBIKLHL9 [Mapview hg19]  KLHL9 [Mapview hg38]
OMIM611201   
Gene and transcription
Genbank (Entrez)AB037775 AK022805 AK023630 AK025468 AK091715
RefSeq transcript (Entrez)NM_001040713 NM_018847
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KLHL9
Cluster EST : UnigeneHs.744736 [ NCBI ]
CGAP (NCI)Hs.744736
Gene ExpressionKLHL9 [ NCBI-GEO ]   KLHL9 [ EBI - ARRAY_EXPRESS ]   KLHL9 [ SEEK ]   KLHL9 [ MEM ]
Gene Expression Viewer (FireBrowse)KLHL9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55958
GTEX Portal (Tissue expression)KLHL9
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P2J3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P2J3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P2J3
Splice isoforms : SwissVarQ9P2J3
PhosPhoSitePlusQ9P2J3
Domaine pattern : Prosite (Expaxy)BTB (PS50097)   
Domains : Interpro (EBI)BACK    BTB-kelch_protein    BTB/POZ_dom    Gal_Oxidase_b-propeller    Kelch_1    SKP1/BTB/POZ   
Domain families : Pfam (Sanger)BACK (PF07707)    BTB (PF00651)    Kelch_1 (PF01344)   
Domain families : Pfam (NCBI)pfam07707    pfam00651    pfam01344   
Domain families : Smart (EMBL)BACK (SM00875)  BTB (SM00225)  Kelch (SM00612)  
Conserved Domain (NCBI)KLHL9
DMDM Disease mutations55958
Blocks (Seattle)KLHL9
SuperfamilyQ9P2J3
Peptide AtlasQ9P2J3
HPRD13929
IPIIPI00002249   IPI01011490   
Protein Interaction databases
DIP (DOE-UCLA)Q9P2J3
IntAct (EBI)Q9P2J3
BioGRIDKLHL9
STRING (EMBL)KLHL9
ZODIACKLHL9
Ontologies - Pathways
QuickGOQ9P2J3
Ontology : AmiGOcytokinesis  ubiquitin-protein transferase activity  protein ubiquitination  protein ubiquitination  midbody  Cul3-RING ubiquitin ligase complex  
Ontology : EGO-EBIcytokinesis  ubiquitin-protein transferase activity  protein ubiquitination  protein ubiquitination  midbody  Cul3-RING ubiquitin ligase complex  
Pathways : KEGGUbiquitin mediated proteolysis   
NDEx NetworkKLHL9
Atlas of Cancer Signalling NetworkKLHL9
Wikipedia pathwaysKLHL9
Orthology - Evolution
OrthoDB55958
Phylogenetic Trees/Animal Genes : TreeFamKLHL9
HOVERGENQ9P2J3
HOGENOMQ9P2J3
Homologs : HomoloGeneKLHL9
Homology/Alignments : Family Browser (UCSC)KLHL9
Gene fusions - Rearrangements
Tumor Fusion PortalKLHL9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKLHL9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KLHL9
dbVarKLHL9
ClinVarKLHL9
1000_GenomesKLHL9 
Exome Variant ServerKLHL9
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP55958
Genomic Variants (DGV)KLHL9 [DGVbeta]
DECIPHERKLHL9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKLHL9 
Mutations
ICGC Data PortalKLHL9 
TCGA Data PortalKLHL9 
Broad Tumor PortalKLHL9
OASIS PortalKLHL9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKLHL9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKLHL9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KLHL9
DgiDB (Drug Gene Interaction Database)KLHL9
DoCM (Curated mutations)KLHL9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KLHL9 (select a term)
intoGenKLHL9
Cancer3DKLHL9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611201   
Orphanet22746   
DisGeNETKLHL9
MedgenKLHL9
Genetic Testing Registry KLHL9
NextProtQ9P2J3 [Medical]
TSGene55958
GENETestsKLHL9
Target ValidationKLHL9
Huge Navigator KLHL9 [HugePedia]
snp3D : Map Gene to Disease55958
BioCentury BCIQKLHL9
ClinGenKLHL9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55958
Chemical/Pharm GKB GenePA38662
Clinical trialKLHL9
Miscellaneous
canSAR (ICR)KLHL9 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLHL9
EVEXKLHL9
GoPubMedKLHL9
iHOPKLHL9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:19:56 CET 2017

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