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KLRC3 (killer cell lectin like receptor C3)

Identity

Alias_nameskiller cell lectin-like receptor subfamily C
Alias_symbol (synonym)NKG2-E
Other aliasNKG2E
HGNC (Hugo) KLRC3
LocusID (NCBI) 3823
Atlas_Id 41092
Location 12p13.2  [Link to chromosome band 12p13]
Location_base_pair Starts at 10412315 and ends at 10420595 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KLRC3   6376
Cards
Entrez_Gene (NCBI)KLRC3  3823  killer cell lectin like receptor C3
AliasesNKG2-E; NKG2E
GeneCards (Weizmann)KLRC3
Ensembl hg19 (Hinxton)ENSG00000205810 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205810 [Gene_View]  chr12:10412315-10420595 [Contig_View]  KLRC3 [Vega]
ICGC DataPortalENSG00000205810
TCGA cBioPortalKLRC3
AceView (NCBI)KLRC3
Genatlas (Paris)KLRC3
WikiGenes3823
SOURCE (Princeton)KLRC3
Genetics Home Reference (NIH)KLRC3
Genomic and cartography
GoldenPath hg38 (UCSC)KLRC3  -     chr12:10412315-10420595 -  12p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KLRC3  -     12p13.2   [Description]    (hg19-Feb_2009)
EnsemblKLRC3 - 12p13.2 [CytoView hg19]  KLRC3 - 12p13.2 [CytoView hg38]
Mapping of homologs : NCBIKLRC3 [Mapview hg19]  KLRC3 [Mapview hg38]
OMIM602892   
Gene and transcription
Genbank (Entrez)AF078550 AF350016 AF350017 AF461157 AK307860
RefSeq transcript (Entrez)NM_002261 NM_007333
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KLRC3
Cluster EST : UnigeneHs.654362 [ NCBI ]
CGAP (NCI)Hs.654362
Alternative Splicing GalleryENSG00000205810
Gene ExpressionKLRC3 [ NCBI-GEO ]   KLRC3 [ EBI - ARRAY_EXPRESS ]   KLRC3 [ SEEK ]   KLRC3 [ MEM ]
Gene Expression Viewer (FireBrowse)KLRC3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3823
GTEX Portal (Tissue expression)KLRC3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ07444   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ07444  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ07444
Splice isoforms : SwissVarQ07444
PhosPhoSitePlusQ07444
Domaine pattern : Prosite (Expaxy)C_TYPE_LECTIN_2 (PS50041)   
Domains : Interpro (EBI)C-type_lectin-like    C-type_lectin-like/link    CTDL_fold    NKR-like_CTLD   
Domain families : Pfam (Sanger)Lectin_C (PF00059)   
Domain families : Pfam (NCBI)pfam00059   
Domain families : Smart (EMBL)CLECT (SM00034)  
Conserved Domain (NCBI)KLRC3
DMDM Disease mutations3823
Blocks (Seattle)KLRC3
SuperfamilyQ07444
Human Protein AtlasENSG00000205810
Peptide AtlasQ07444
HPRD04203
IPIIPI00017478   IPI00219135   IPI00965851   
Protein Interaction databases
DIP (DOE-UCLA)Q07444
IntAct (EBI)Q07444
FunCoupENSG00000205810
BioGRIDKLRC3
STRING (EMBL)KLRC3
ZODIACKLRC3
Ontologies - Pathways
QuickGOQ07444
Ontology : AmiGOtransmembrane signaling receptor activity  cellular defense response  signal transduction  integral component of membrane  carbohydrate binding  
Ontology : EGO-EBItransmembrane signaling receptor activity  cellular defense response  signal transduction  integral component of membrane  carbohydrate binding  
Pathways : BIOCARTARas-Independent pathway in NK cell-mediated cytotoxicity [Genes]   
Pathways : KEGGAntigen processing and presentation    Natural killer cell mediated cytotoxicity   
NDEx NetworkKLRC3
Atlas of Cancer Signalling NetworkKLRC3
Wikipedia pathwaysKLRC3
Orthology - Evolution
OrthoDB3823
GeneTree (enSembl)ENSG00000205810
Phylogenetic Trees/Animal Genes : TreeFamKLRC3
HOVERGENQ07444
HOGENOMQ07444
Homologs : HomoloGeneKLRC3
Homology/Alignments : Family Browser (UCSC)KLRC3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKLRC3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KLRC3
dbVarKLRC3
ClinVarKLRC3
1000_GenomesKLRC3 
Exome Variant ServerKLRC3
ExAC (Exome Aggregation Consortium)KLRC3 (select the gene name)
Genetic variants : HAPMAP3823
Genomic Variants (DGV)KLRC3 [DGVbeta]
DECIPHERKLRC3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKLRC3 
Mutations
ICGC Data PortalKLRC3 
TCGA Data PortalKLRC3 
Broad Tumor PortalKLRC3
OASIS PortalKLRC3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKLRC3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKLRC3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KLRC3
DgiDB (Drug Gene Interaction Database)KLRC3
DoCM (Curated mutations)KLRC3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KLRC3 (select a term)
intoGenKLRC3
Cancer3DKLRC3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602892   
Orphanet
MedgenKLRC3
Genetic Testing Registry KLRC3
NextProtQ07444 [Medical]
TSGene3823
GENETestsKLRC3
Target ValidationKLRC3
Huge Navigator KLRC3 [HugePedia]
snp3D : Map Gene to Disease3823
BioCentury BCIQKLRC3
ClinGenKLRC3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3823
Chemical/Pharm GKB GenePA30165
Clinical trialKLRC3
Miscellaneous
canSAR (ICR)KLRC3 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLRC3
EVEXKLRC3
GoPubMedKLRC3
iHOPKLRC3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:14:45 CEST 2017

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