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KLRF2 (killer cell lectin like receptor F2)

Identity

Alias_nameskiller cell lectin-like receptor subfamily F, member 2
Alias_symbol (synonym)NKp65
Other alias
HGNC (Hugo) KLRF2
LocusID (NCBI) 100431172
Atlas_Id 64990
Location 12p13.31  [Link to chromosome band 12p13]
Location_base_pair Starts at 9881489 and ends at 9895833 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KLRF2   37646
Cards
Entrez_Gene (NCBI)KLRF2  100431172  killer cell lectin like receptor F2
AliasesNKp65
GeneCards (Weizmann)KLRF2
Ensembl hg19 (Hinxton)ENSG00000256797 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000256797 [Gene_View]  chr12:9881489-9895833 [Contig_View]  KLRF2 [Vega]
ICGC DataPortalENSG00000256797
TCGA cBioPortalKLRF2
AceView (NCBI)KLRF2
Genatlas (Paris)KLRF2
WikiGenes100431172
SOURCE (Princeton)KLRF2
Genetics Home Reference (NIH)KLRF2
Genomic and cartography
GoldenPath hg38 (UCSC)KLRF2  -     chr12:9881489-9895833 +  12p13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KLRF2  -     12p13.31   [Description]    (hg19-Feb_2009)
EnsemblKLRF2 - 12p13.31 [CytoView hg19]  KLRF2 - 12p13.31 [CytoView hg38]
Mapping of homologs : NCBIKLRF2 [Mapview hg19]  KLRF2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)GQ398770
RefSeq transcript (Entrez)NM_001190765
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KLRF2
Cluster EST : UnigeneHs.725113 [ NCBI ]
CGAP (NCI)Hs.725113
Alternative Splicing GalleryENSG00000256797
Gene ExpressionKLRF2 [ NCBI-GEO ]   KLRF2 [ EBI - ARRAY_EXPRESS ]   KLRF2 [ SEEK ]   KLRF2 [ MEM ]
Gene Expression Viewer (FireBrowse)KLRF2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100431172
GTEX Portal (Tissue expression)KLRF2
Protein : pattern, domain, 3D structure
UniProt/SwissProtD3W0D1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtD3W0D1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProD3W0D1
Splice isoforms : SwissVarD3W0D1
PhosPhoSitePlusD3W0D1
Domaine pattern : Prosite (Expaxy)C_TYPE_LECTIN_2 (PS50041)   
Domains : Interpro (EBI)C-type_lectin-like    C-type_lectin-like/link    CTDL_fold    NKR-like_CTLD   
Domain families : Pfam (Sanger)Lectin_C (PF00059)   
Domain families : Pfam (NCBI)pfam00059   
Domain families : Smart (EMBL)CLECT (SM00034)  
Conserved Domain (NCBI)KLRF2
DMDM Disease mutations100431172
Blocks (Seattle)KLRF2
PDB (SRS)4IOP   
PDB (PDBSum)4IOP   
PDB (IMB)4IOP   
PDB (RSDB)4IOP   
Structural Biology KnowledgeBase4IOP   
SCOP (Structural Classification of Proteins)4IOP   
CATH (Classification of proteins structures)4IOP   
SuperfamilyD3W0D1
Human Protein AtlasENSG00000256797
Peptide AtlasD3W0D1
IPIIPI00956523   
Protein Interaction databases
DIP (DOE-UCLA)D3W0D1
IntAct (EBI)D3W0D1
FunCoupENSG00000256797
BioGRIDKLRF2
STRING (EMBL)KLRF2
ZODIACKLRF2
Ontologies - Pathways
QuickGOD3W0D1
Ontology : AmiGOprotein binding  integral component of plasma membrane  carbohydrate binding  protein homodimerization activity  natural killer cell degranulation  cytokine secretion  
Ontology : EGO-EBIprotein binding  integral component of plasma membrane  carbohydrate binding  protein homodimerization activity  natural killer cell degranulation  cytokine secretion  
NDEx NetworkKLRF2
Atlas of Cancer Signalling NetworkKLRF2
Wikipedia pathwaysKLRF2
Orthology - Evolution
OrthoDB100431172
GeneTree (enSembl)ENSG00000256797
Phylogenetic Trees/Animal Genes : TreeFamKLRF2
HOVERGEND3W0D1
HOGENOMD3W0D1
Homologs : HomoloGeneKLRF2
Homology/Alignments : Family Browser (UCSC)KLRF2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKLRF2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KLRF2
dbVarKLRF2
ClinVarKLRF2
1000_GenomesKLRF2 
Exome Variant ServerKLRF2
ExAC (Exome Aggregation Consortium)KLRF2 (select the gene name)
Genetic variants : HAPMAP100431172
Genomic Variants (DGV)KLRF2 [DGVbeta]
DECIPHERKLRF2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKLRF2 
Mutations
ICGC Data PortalKLRF2 
TCGA Data PortalKLRF2 
Broad Tumor PortalKLRF2
OASIS PortalKLRF2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKLRF2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKLRF2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KLRF2
DgiDB (Drug Gene Interaction Database)KLRF2
DoCM (Curated mutations)KLRF2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KLRF2 (select a term)
intoGenKLRF2
Cancer3DKLRF2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKLRF2
Genetic Testing Registry KLRF2
NextProtD3W0D1 [Medical]
TSGene100431172
GENETestsKLRF2
Huge Navigator KLRF2 [HugePedia]
snp3D : Map Gene to Disease100431172
BioCentury BCIQKLRF2
ClinGenKLRF2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100431172
Chemical/Pharm GKB GenePA165512949
Clinical trialKLRF2
Miscellaneous
canSAR (ICR)KLRF2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLRF2
EVEXKLRF2
GoPubMedKLRF2
iHOPKLRF2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:18:21 CEST 2017

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