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KLRG2 (killer cell lectin like receptor G2)

Identity

Alias_namesmember B
Alias_symbol (synonym)FLJ44186
CLEC15B
Other alias
HGNC (Hugo) KLRG2
LocusID (NCBI) 346689
Atlas_Id 52495
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 139138088 and ends at 139168457 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CTTN (11q13.3) / KLRG2 (7q34)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KLRG2   24778
Cards
Entrez_Gene (NCBI)KLRG2  346689  killer cell lectin like receptor G2
AliasesCLEC15B
GeneCards (Weizmann)KLRG2
Ensembl hg19 (Hinxton)ENSG00000188883 [Gene_View]  chr7:139138088-139168457 [Contig_View]  KLRG2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000188883 [Gene_View]  chr7:139138088-139168457 [Contig_View]  KLRG2 [Vega]
ICGC DataPortalENSG00000188883
TCGA cBioPortalKLRG2
AceView (NCBI)KLRG2
Genatlas (Paris)KLRG2
WikiGenes346689
SOURCE (Princeton)KLRG2
Genetics Home Reference (NIH)KLRG2
Genomic and cartography
GoldenPath hg19 (UCSC)KLRG2  -     chr7:139138088-139168457 -  7q34   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KLRG2  -     7q34   [Description]    (hg38-Dec_2013)
EnsemblKLRG2 - 7q34 [CytoView hg19]  KLRG2 - 7q34 [CytoView hg38]
Mapping of homologs : NCBIKLRG2 [Mapview hg19]  KLRG2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA742567 AK126174 BC104963 BC104965 BC110858
RefSeq transcript (Entrez)NM_198508
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)KLRG2
Cluster EST : UnigeneHs.17572 [ NCBI ]
CGAP (NCI)Hs.17572
Alternative Splicing GalleryENSG00000188883
Gene ExpressionKLRG2 [ NCBI-GEO ]   KLRG2 [ EBI - ARRAY_EXPRESS ]   KLRG2 [ SEEK ]   KLRG2 [ MEM ]
Gene Expression Viewer (FireBrowse)KLRG2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)346689
GTEX Portal (Tissue expression)KLRG2
Protein : pattern, domain, 3D structure
UniProt/SwissProtA4D1S0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA4D1S0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA4D1S0
Splice isoforms : SwissVarA4D1S0
PhosPhoSitePlusA4D1S0
Domaine pattern : Prosite (Expaxy)C_TYPE_LECTIN_2 (PS50041)   
Domains : Interpro (EBI)C-type_lectin    C-type_lectin-like    C-type_lectin_fold   
Domain families : Pfam (Sanger)Lectin_C (PF00059)   
Domain families : Pfam (NCBI)pfam00059   
Domain families : Smart (EMBL)CLECT (SM00034)  
Conserved Domain (NCBI)KLRG2
DMDM Disease mutations346689
Blocks (Seattle)KLRG2
SuperfamilyA4D1S0
Human Protein AtlasENSG00000188883
Peptide AtlasA4D1S0
HPRD13485
IPIIPI00394851   IPI00719758   
Protein Interaction databases
DIP (DOE-UCLA)A4D1S0
IntAct (EBI)A4D1S0
FunCoupENSG00000188883
BioGRIDKLRG2
STRING (EMBL)KLRG2
ZODIACKLRG2
Ontologies - Pathways
QuickGOA4D1S0
Ontology : AmiGOintegral component of membrane  carbohydrate binding  
Ontology : EGO-EBIintegral component of membrane  carbohydrate binding  
NDEx NetworkKLRG2
Atlas of Cancer Signalling NetworkKLRG2
Wikipedia pathwaysKLRG2
Orthology - Evolution
OrthoDB346689
GeneTree (enSembl)ENSG00000188883
Phylogenetic Trees/Animal Genes : TreeFamKLRG2
HOVERGENA4D1S0
HOGENOMA4D1S0
Homologs : HomoloGeneKLRG2
Homology/Alignments : Family Browser (UCSC)KLRG2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKLRG2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KLRG2
dbVarKLRG2
ClinVarKLRG2
1000_GenomesKLRG2 
Exome Variant ServerKLRG2
ExAC (Exome Aggregation Consortium)KLRG2 (select the gene name)
Genetic variants : HAPMAP346689
Genomic Variants (DGV)KLRG2 [DGVbeta]
DECIPHER (Syndromes)7:139138088-139168457  ENSG00000188883
CONAN: Copy Number AnalysisKLRG2 
Mutations
ICGC Data PortalKLRG2 
TCGA Data PortalKLRG2 
Broad Tumor PortalKLRG2
OASIS PortalKLRG2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKLRG2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKLRG2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KLRG2
DgiDB (Drug Gene Interaction Database)KLRG2
DoCM (Curated mutations)KLRG2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KLRG2 (select a term)
intoGenKLRG2
Cancer3DKLRG2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKLRG2
Genetic Testing Registry KLRG2
NextProtA4D1S0 [Medical]
TSGene346689
GENETestsKLRG2
Huge Navigator KLRG2 [HugePedia]
snp3D : Map Gene to Disease346689
BioCentury BCIQKLRG2
ClinGenKLRG2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD346689
Chemical/Pharm GKB GenePA162393624
Clinical trialKLRG2
Miscellaneous
canSAR (ICR)KLRG2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKLRG2
EVEXKLRG2
GoPubMedKLRG2
iHOPKLRG2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:12:10 CET 2017

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