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KMT5B (lysine methyltransferase 5B)

Identity

Alias (NCBI)CGI-85
CGI85
MRD51
SUV420H1
HGNC (Hugo) KMT5B
HGNC Alias symbCGI-85
HGNC Previous nameSUV420H1
HGNC Previous namesuppressor of variegation 4-20 homolog 1 (Drosophila)
 lysine (K)-specific methyltransferase 5B
LocusID (NCBI) 51111
Atlas_Id 77843
Location 11q13.2  [Link to chromosome band 11q13]
Location_base_pair Starts at 68154863 and ends at 68213296 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KMT5B (11q13.2)::CATSPER1 (11q13.1)KMT5B (11q13.2)::COX4I1 (16q24.1)KMT5B (11q13.2)::KMT5B (11q13.2)
KMT5B (11q13.2)::MTL5 (11q13.3)KMT5B (11q13.2)::MYO1D (17q11.2)KMT5B (11q13.2)::PNP (14q11.2)
KMT5B (11q13.2)::SLITRK4 (Xq27.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)KMT5B   24283
Cards
Entrez_Gene (NCBI)KMT5B    lysine methyltransferase 5B
AliasesCGI-85; CGI85; MRD51; SUV420H1
GeneCards (Weizmann)KMT5B
Ensembl hg19 (Hinxton)ENSG00000110066 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000110066 [Gene_View]  ENSG00000110066 [Sequence]  chr11:68154863-68213296 [Contig_View]  KMT5B [Vega]
ICGC DataPortalENSG00000110066
TCGA cBioPortalKMT5B
AceView (NCBI)KMT5B
Genatlas (Paris)KMT5B
SOURCE (Princeton)KMT5B
Genetics Home Reference (NIH)KMT5B
Genomic and cartography
GoldenPath hg38 (UCSC)KMT5B  -     chr11:68154863-68213296 -  11q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KMT5B  -     11q13.2   [Description]    (hg19-Feb_2009)
GoldenPathKMT5B - 11q13.2 [CytoView hg19]  KMT5B - 11q13.2 [CytoView hg38]
ImmunoBaseENSG00000110066
Genome Data Viewer NCBIKMT5B [Mapview hg19]  
OMIM610881   617788   
Gene and transcription
Genbank (Entrez)AF151843 AF264782 AI659791 AK000046 AK025183
RefSeq transcript (Entrez)NM_001300907 NM_001300908 NM_001300909 NM_001363566 NM_001369424 NM_001369425 NM_001369426 NM_001369427 NM_001369428 NM_001369429 NM_001369430 NM_001369431 NM_001369432 NM_001369433 NM_016028 NM_017635
Consensus coding sequences : CCDS (NCBI)KMT5B
Gene ExpressionKMT5B [ NCBI-GEO ]   KMT5B [ EBI - ARRAY_EXPRESS ]   KMT5B [ SEEK ]   KMT5B [ MEM ]
Gene Expression Viewer (FireBrowse)KMT5B [ Firebrowse - Broad ]
GenevisibleExpression of KMT5B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51111
GTEX Portal (Tissue expression)KMT5B
Human Protein AtlasENSG00000110066-KMT5B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KMT5B
Human Protein Atlas [tissue]ENSG00000110066-KMT5B [tissue]
HPRD11616
Protein Interaction databases
BioGRIDKMT5B
STRING (EMBL)KMT5B
ZODIACKMT5B
Ontologies - Pathways
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXKMT5B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jan 20 13:23:55 CET 2022

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