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KPRP (keratinocyte proline rich protein)

Identity

Alias_namesC1orf45
chromosome 1 open reading frame 45
keratinocyte proline-rich protein
Other alias
HGNC (Hugo) KPRP
LocusID (NCBI) 448834
Atlas_Id 64996
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 152758030 and ends at 152762053 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KPRP   31823
Cards
Entrez_Gene (NCBI)KPRP  448834  keratinocyte proline rich protein
AliasesC1orf45
GeneCards (Weizmann)KPRP
Ensembl hg19 (Hinxton)ENSG00000203786 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000203786 [Gene_View]  chr1:152758030-152762053 [Contig_View]  KPRP [Vega]
ICGC DataPortalENSG00000203786
TCGA cBioPortalKPRP
AceView (NCBI)KPRP
Genatlas (Paris)KPRP
WikiGenes448834
SOURCE (Princeton)KPRP
Genetics Home Reference (NIH)KPRP
Genomic and cartography
GoldenPath hg38 (UCSC)KPRP  -     chr1:152758030-152762053 +  1q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KPRP  -     1q21.3   [Description]    (hg19-Feb_2009)
EnsemblKPRP - 1q21.3 [CytoView hg19]  KPRP - 1q21.3 [CytoView hg38]
Mapping of homologs : NCBIKPRP [Mapview hg19]  KPRP [Mapview hg38]
OMIM613260   
Gene and transcription
Genbank (Entrez)AY960854 BC152831
RefSeq transcript (Entrez)NM_001025231
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KPRP
Cluster EST : UnigeneHs.149386 [ NCBI ]
CGAP (NCI)Hs.149386
Alternative Splicing GalleryENSG00000203786
Gene ExpressionKPRP [ NCBI-GEO ]   KPRP [ EBI - ARRAY_EXPRESS ]   KPRP [ SEEK ]   KPRP [ MEM ]
Gene Expression Viewer (FireBrowse)KPRP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)448834
GTEX Portal (Tissue expression)KPRP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5T749   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5T749  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5T749
Splice isoforms : SwissVarQ5T749
PhosPhoSitePlusQ5T749
Domains : Interpro (EBI)KPRP   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KPRP
DMDM Disease mutations448834
Blocks (Seattle)KPRP
SuperfamilyQ5T749
Human Protein AtlasENSG00000203786
Peptide AtlasQ5T749
IPIIPI00514908   
Protein Interaction databases
DIP (DOE-UCLA)Q5T749
IntAct (EBI)Q5T749
FunCoupENSG00000203786
BioGRIDKPRP
STRING (EMBL)KPRP
ZODIACKPRP
Ontologies - Pathways
QuickGOQ5T749
Ontology : AmiGOprotein binding  cytoplasm  extracellular exosome  
Ontology : EGO-EBIprotein binding  cytoplasm  extracellular exosome  
NDEx NetworkKPRP
Atlas of Cancer Signalling NetworkKPRP
Wikipedia pathwaysKPRP
Orthology - Evolution
OrthoDB448834
GeneTree (enSembl)ENSG00000203786
Phylogenetic Trees/Animal Genes : TreeFamKPRP
HOVERGENQ5T749
HOGENOMQ5T749
Homologs : HomoloGeneKPRP
Homology/Alignments : Family Browser (UCSC)KPRP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKPRP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KPRP
dbVarKPRP
ClinVarKPRP
1000_GenomesKPRP 
Exome Variant ServerKPRP
ExAC (Exome Aggregation Consortium)KPRP (select the gene name)
Genetic variants : HAPMAP448834
Genomic Variants (DGV)KPRP [DGVbeta]
DECIPHERKPRP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKPRP 
Mutations
ICGC Data PortalKPRP 
TCGA Data PortalKPRP 
Broad Tumor PortalKPRP
OASIS PortalKPRP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKPRP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKPRP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KPRP
DgiDB (Drug Gene Interaction Database)KPRP
DoCM (Curated mutations)KPRP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KPRP (select a term)
intoGenKPRP
Cancer3DKPRP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613260   
Orphanet
MedgenKPRP
Genetic Testing Registry KPRP
NextProtQ5T749 [Medical]
TSGene448834
GENETestsKPRP
Target ValidationKPRP
Huge Navigator KPRP [HugePedia]
snp3D : Map Gene to Disease448834
BioCentury BCIQKPRP
ClinGenKPRP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD448834
Chemical/Pharm GKB GenePA162393640
Clinical trialKPRP
Miscellaneous
canSAR (ICR)KPRP (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKPRP
EVEXKPRP
GoPubMedKPRP
iHOPKPRP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:54:52 CEST 2017

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