Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KRBOX1-AS1 (KRBOX1 antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) KRBOX1-AS1
HGNC Alias symbFLJ32776
HGNC Previous nameKRBOX1 antisense RNA 1 (non-protein coding)
LocusID (NCBI) 100506275
Atlas_Id 65001
Location 3p22.1  [Link to chromosome band 3p22]
Location_base_pair Starts at 42934244 and ends at 42936785 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRBOX1-AS1   42942
Cards
Entrez_Gene (NCBI)KRBOX1-AS1  100506275  KRBOX1 antisense RNA 1
Aliases
GeneCards (Weizmann)KRBOX1-AS1
Ensembl hg19 (Hinxton)ENSG00000206552 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000206552 [Gene_View]  ENSG00000206552 [Sequence]  chr3:42934244-42936785 [Contig_View]  KRBOX1-AS1 [Vega]
ICGC DataPortalENSG00000206552
TCGA cBioPortalKRBOX1-AS1
AceView (NCBI)KRBOX1-AS1
Genatlas (Paris)KRBOX1-AS1
WikiGenes100506275
SOURCE (Princeton)KRBOX1-AS1
Genetics Home Reference (NIH)KRBOX1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)KRBOX1-AS1  -     chr3:42934244-42936785 -  3p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KRBOX1-AS1  -     3p22.1   [Description]    (hg19-Feb_2009)
GoldenPathKRBOX1-AS1 - 3p22.1 [CytoView hg19]  KRBOX1-AS1 - 3p22.1 [CytoView hg38]
ImmunoBaseENSG00000206552
genome Data Viewer NCBIKRBOX1-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK057338
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KRBOX1-AS1
Alternative Splicing GalleryENSG00000206552
Gene ExpressionKRBOX1-AS1 [ NCBI-GEO ]   KRBOX1-AS1 [ EBI - ARRAY_EXPRESS ]   KRBOX1-AS1 [ SEEK ]   KRBOX1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)KRBOX1-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of KRBOX1-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506275
GTEX Portal (Tissue expression)KRBOX1-AS1
Human Protein AtlasENSG00000206552-KRBOX1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KRBOX1-AS1
DMDM Disease mutations100506275
Blocks (Seattle)KRBOX1-AS1
Human Protein Atlas [tissue]ENSG00000206552-KRBOX1-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000206552
BioGRIDKRBOX1-AS1
STRING (EMBL)KRBOX1-AS1
ZODIACKRBOX1-AS1
Ontologies - Pathways
Huge Navigator KRBOX1-AS1 [HugePedia]
snp3D : Map Gene to Disease100506275
BioCentury BCIQKRBOX1-AS1
ClinGenKRBOX1-AS1
Clinical trials, drugs, therapy
Protein Interactions : CTD100506275
Clinical trialKRBOX1-AS1
Miscellaneous
canSAR (ICR)KRBOX1-AS1 (select the gene name)
HarmonizomeKRBOX1-AS1
DataMed IndexKRBOX1-AS1
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRBOX1-AS1
EVEXKRBOX1-AS1
GoPubMedKRBOX1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jul 16 16:00:13 CEST 2020

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