Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KRT14 (keratin 14)

Identity

Other namesCK14
EBS3
EBS4
K14
NFJ
HGNC (Hugo) KRT14
LocusID (NCBI) 3861
Location 17q21.2
Location_base_pair Starts at 39738531 and ends at 39743147 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)KRT14   6416
Cards
Entrez_Gene (NCBI)KRT14  3861  keratin 14
GeneCards (Weizmann)KRT14
Ensembl (Hinxton)ENSG00000186847 [Gene_View]  chr17:39738531-39743147 [Contig_View]  KRT14 [Vega]
ICGC DataPortalENSG00000186847
cBioPortalKRT14
AceView (NCBI)KRT14
Genatlas (Paris)KRT14
WikiGenes3861
SOURCE (Princeton)NM_000526
Genomic and cartography
GoldenPath (UCSC)KRT14  -  17q21.2   chr17:39738531-39743147 -  17q21.2   [Description]    (hg19-Feb_2009)
EnsemblKRT14 - 17q21.2 [CytoView]
Mapping of homologs : NCBIKRT14 [Mapview]
OMIM125595   131760   131800   131900   148066   161000   601001   
Gene and transcription
Genbank (Entrez)BC002690 BC019097 BC042437 BC094830 BT007186
RefSeq transcript (Entrez)NM_000526
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NG_008624 NT_010783 NW_001838435 NW_004929407
Consensus coding sequences : CCDS (NCBI)KRT14
Cluster EST : UnigeneHs.654380 [ NCBI ]
CGAP (NCI)Hs.654380
Alternative Splicing : Fast-db (Paris)GSHG0013397
Alternative Splicing GalleryENSG00000186847
Gene ExpressionKRT14 [ NCBI-GEO ]     KRT14 [ SEEK ]   KRT14 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP02533 (Uniprot)
NextProtP02533  [Medical]
With graphics : InterProP02533
Splice isoforms : SwissVarP02533 (Swissvar)
Domaine pattern : Prosite (Expaxy)IF (PS00226)   
Domains : Interpro (EBI)IF [organisation]   Intermediate_filament_CS [organisation]   Keratin_I [organisation]   Prefoldin [organisation]  
Related proteins : CluSTrP02533
Domain families : Pfam (Sanger)Filament (PF00038)   
Domain families : Pfam (NCBI)pfam00038   
DMDM Disease mutations3861
Blocks (Seattle)P02533
PDB (SRS)3TNU   
PDB (PDBSum)3TNU   
PDB (IMB)3TNU   
PDB (RSDB)3TNU   
Human Protein AtlasENSG00000186847 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasP02533
HPRD01017
IPIIPI00384444   IPI00654614   
Protein Interaction databases
DIP (DOE-UCLA)P02533
IntAct (EBI)P02533
FunCoupENSG00000186847
BioGRIDKRT14
InParanoidP02533
Interologous Interaction database P02533
IntegromeDBKRT14
STRING (EMBL)KRT14
Ontologies - Pathways
Ontology : AmiGOstructural constituent of cytoskeleton  protein binding  nucleus  nucleolus  cytoplasm  cytosol  intermediate filament  intermediate filament  epidermis development  response to zinc ion  response to ionizing radiation  epithelial cell differentiation  hemidesmosome assembly  cell junction assembly  keratin filament  intermediate filament bundle assembly  cell periphery  
Ontology : EGO-EBIstructural constituent of cytoskeleton  protein binding  nucleus  nucleolus  cytoplasm  cytosol  intermediate filament  intermediate filament  epidermis development  response to zinc ion  response to ionizing radiation  epithelial cell differentiation  hemidesmosome assembly  cell junction assembly  keratin filament  intermediate filament bundle assembly  cell periphery  
Protein Interaction DatabaseKRT14
Wikipedia pathwaysKRT14
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)KRT14
snp3D : Map Gene to Disease3861
SNP (GeneSNP Utah)KRT14
SNP : HGBaseKRT14
Genetic variants : HAPMAPKRT14
Exome VariantKRT14
1000_GenomesKRT14 
ICGC programENSG00000186847 
Somatic Mutations in Cancer : COSMICKRT14 
CONAN: Copy Number AnalysisKRT14 
Mutations and Diseases : HGMDKRT14
Genomic VariantsKRT14  KRT14 [DGVbeta]
dbVarKRT14
ClinVarKRT14
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM125595    131760    131800    131900    148066    161000    601001   
MedgenKRT14
GENETestsKRT14
Disease Genetic AssociationKRT14
Huge Navigator KRT14 [HugePedia]  KRT14 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneKRT14
Homology/Alignments : Family Browser (UCSC)KRT14
Phylogenetic Trees/Animal Genes : TreeFamKRT14
Chemical/Protein Interactions : CTD3861
Chemical/Pharm GKB GenePA30203
Clinical trialKRT14
Cancer Resource (Charite)ENSG00000186847
Other databases
Probes
Litterature
PubMed113 Pubmed reference(s) in Entrez
CoreMineKRT14
iHOPKRT14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jul 11 17:02:25 CEST 2014

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