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KRT16P1 (keratin 16 pseudogene 1)

Identity

Other aliasKRT14P
KRT16P
HGNC (Hugo) KRT16P1
LocusID (NCBI) 729252
Atlas_Id 65009
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 18439908 and ends at 18442894 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRT16P1   6420
Cards
Entrez_Gene (NCBI)KRT16P1  729252  keratin 16 pseudogene 1
AliasesKRT14P; KRT16P
GeneCards (Weizmann)KRT16P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:18439908-18442894 [Contig_View]  KRT16P1 [Vega]
TCGA cBioPortalKRT16P1
AceView (NCBI)KRT16P1
Genatlas (Paris)KRT16P1
WikiGenes729252
SOURCE (Princeton)KRT16P1
Genetics Home Reference (NIH)KRT16P1
Genomic and cartography
GoldenPath hg38 (UCSC)KRT16P1  -     chr17:18439908-18442894 +  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KRT16P1  -     17p11.2   [Description]    (hg19-Feb_2009)
EnsemblKRT16P1 - 17p11.2 [CytoView hg19]  KRT16P1 - 17p11.2 [CytoView hg38]
Mapping of homologs : NCBIKRT16P1 [Mapview hg19]  KRT16P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK301679
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KRT16P1
Cluster EST : UnigeneHs.585811 [ NCBI ]
CGAP (NCI)Hs.585811
Gene ExpressionKRT16P1 [ NCBI-GEO ]   KRT16P1 [ EBI - ARRAY_EXPRESS ]   KRT16P1 [ SEEK ]   KRT16P1 [ MEM ]
Gene Expression Viewer (FireBrowse)KRT16P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729252
GTEX Portal (Tissue expression)KRT16P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KRT16P1
DMDM Disease mutations729252
Blocks (Seattle)KRT16P1
Protein Interaction databases
BioGRIDKRT16P1
STRING (EMBL)KRT16P1
ZODIACKRT16P1
Ontologies - Pathways
Huge Navigator KRT16P1 [HugePedia]
snp3D : Map Gene to Disease729252
BioCentury BCIQKRT16P1
ClinGenKRT16P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729252
Chemical/Pharm GKB GenePA30207
Clinical trialKRT16P1
Miscellaneous
canSAR (ICR)KRT16P1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRT16P1
EVEXKRT16P1
GoPubMedKRT16P1
iHOPKRT16P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:35:23 CET 2017

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