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KRT16P3 (keratin 16 pseudogene 3)

Identity

Alias_namesKERSMCR
cytokeratin, Smith Magenis syndrome chromosome region
Alias_symbol (synonym)MGC102966
Other alias
HGNC (Hugo) KRT16P3
LocusID (NCBI) 644945
Atlas_Id 65011
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 20501514 and ends at 20504498 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRT16P3   37808
Cards
Entrez_Gene (NCBI)KRT16P3  644945  keratin 16 pseudogene 3
AliasesKERSMCR
GeneCards (Weizmann)KRT16P3
Ensembl hg19 (Hinxton)ENSG00000214822 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214822 [Gene_View]  chr17:20501514-20504498 [Contig_View]  KRT16P3 [Vega]
ICGC DataPortalENSG00000214822
TCGA cBioPortalKRT16P3
AceView (NCBI)KRT16P3
Genatlas (Paris)KRT16P3
WikiGenes644945
SOURCE (Princeton)KRT16P3
Genetics Home Reference (NIH)KRT16P3
Genomic and cartography
GoldenPath hg38 (UCSC)KRT16P3  -     chr17:20501514-20504498 -  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KRT16P3  -     17p11.2   [Description]    (hg19-Feb_2009)
EnsemblKRT16P3 - 17p11.2 [CytoView hg19]  KRT16P3 - 17p11.2 [CytoView hg38]
Mapping of homologs : NCBIKRT16P3 [Mapview hg19]  KRT16P3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC110641 DB013784
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KRT16P3
Cluster EST : UnigeneHs.572477 [ NCBI ]
CGAP (NCI)Hs.572477
Alternative Splicing GalleryENSG00000214822
Gene ExpressionKRT16P3 [ NCBI-GEO ]   KRT16P3 [ EBI - ARRAY_EXPRESS ]   KRT16P3 [ SEEK ]   KRT16P3 [ MEM ]
Gene Expression Viewer (FireBrowse)KRT16P3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)644945
GTEX Portal (Tissue expression)KRT16P3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KRT16P3
DMDM Disease mutations644945
Blocks (Seattle)KRT16P3
Human Protein AtlasENSG00000214822
IPIIPI00929669   
Protein Interaction databases
FunCoupENSG00000214822
BioGRIDKRT16P3
STRING (EMBL)KRT16P3
ZODIACKRT16P3
Ontologies - Pathways
Huge Navigator KRT16P3 [HugePedia]
snp3D : Map Gene to Disease644945
BioCentury BCIQKRT16P3
ClinGenKRT16P3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644945
Clinical trialKRT16P3
Miscellaneous
canSAR (ICR)KRT16P3 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRT16P3
EVEXKRT16P3
GoPubMedKRT16P3
iHOPKRT16P3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:12:07 CEST 2017

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