Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KRT18P55 (keratin 18 pseudogene 55)

Identity

Other alias-
HGNC (Hugo) KRT18P55
LocusID (NCBI) 284085
Atlas_Id 65013
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 26603012 and ends at 26634408 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRT18P55   26874
Cards
Entrez_Gene (NCBI)KRT18P55  284085  keratin 18 pseudogene 55
Aliases
GeneCards (Weizmann)KRT18P55
Ensembl hg19 (Hinxton)ENSG00000265480 [Gene_View]  chr17:26603012-26634408 [Contig_View]  KRT18P55 [Vega]
Ensembl hg38 (Hinxton)ENSG00000265480 [Gene_View]  chr17:26603012-26634408 [Contig_View]  KRT18P55 [Vega]
ICGC DataPortalENSG00000265480
TCGA cBioPortalKRT18P55
AceView (NCBI)KRT18P55
Genatlas (Paris)KRT18P55
WikiGenes284085
SOURCE (Princeton)KRT18P55
Genetics Home Reference (NIH)KRT18P55
Genomic and cartography
GoldenPath hg19 (UCSC)KRT18P55  -     chr17:26603012-26634408 -  17q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KRT18P55  -     17q11.2   [Description]    (hg38-Dec_2013)
EnsemblKRT18P55 - 17q11.2 [CytoView hg19]  KRT18P55 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBIKRT18P55 [Mapview hg19]  KRT18P55 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097823 BC112026 BC112028 DQ597097
RefSeq transcript (Entrez)NM_173624
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)KRT18P55
Cluster EST : UnigeneHs.371796 [ NCBI ]
CGAP (NCI)Hs.371796
Alternative Splicing GalleryENSG00000265480
Gene ExpressionKRT18P55 [ NCBI-GEO ]   KRT18P55 [ EBI - ARRAY_EXPRESS ]   KRT18P55 [ SEEK ]   KRT18P55 [ MEM ]
Gene Expression Viewer (FireBrowse)KRT18P55 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284085
GTEX Portal (Tissue expression)KRT18P55
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KRT18P55
DMDM Disease mutations284085
Blocks (Seattle)KRT18P55
Human Protein AtlasENSG00000265480
HPRD08284
IPIIPI00167259   
Protein Interaction databases
FunCoupENSG00000265480
BioGRIDKRT18P55
STRING (EMBL)KRT18P55
ZODIACKRT18P55
Ontologies - Pathways
Huge Navigator KRT18P55 [HugePedia]
snp3D : Map Gene to Disease284085
BioCentury BCIQKRT18P55
ClinGenKRT18P55
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284085
Clinical trialKRT18P55
Miscellaneous
canSAR (ICR)KRT18P55 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRT18P55
EVEXKRT18P55
GoPubMedKRT18P55
iHOPKRT18P55
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:10:11 CET 2017

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