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KRT24 (keratin 24)

Identity

Alias_nameskeratin 24, type I
Alias_symbol (synonym)FLJ20261
MGC138169
MGC138173
Other aliasK24
KA24
HGNC (Hugo) KRT24
LocusID (NCBI) 192666
Atlas_Id 65017
Location 17q21.2  [Link to chromosome band 17q21]
Location_base_pair Starts at 40697991 and ends at 40703750 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
EFTUD2 (17q21.31) / KRT24 (17q21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRT24   18527
Cards
Entrez_Gene (NCBI)KRT24  192666  keratin 24
AliasesK24; KA24
GeneCards (Weizmann)KRT24
Ensembl hg19 (Hinxton)ENSG00000167916 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167916 [Gene_View]  chr17:40697991-40703750 [Contig_View]  KRT24 [Vega]
ICGC DataPortalENSG00000167916
TCGA cBioPortalKRT24
AceView (NCBI)KRT24
Genatlas (Paris)KRT24
WikiGenes192666
SOURCE (Princeton)KRT24
Genetics Home Reference (NIH)KRT24
Genomic and cartography
GoldenPath hg38 (UCSC)KRT24  -     chr17:40697991-40703750 -  17q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KRT24  -     17q21.2   [Description]    (hg19-Feb_2009)
EnsemblKRT24 - 17q21.2 [CytoView hg19]  KRT24 - 17q21.2 [CytoView hg38]
Mapping of homologs : NCBIKRT24 [Mapview hg19]  KRT24 [Mapview hg38]
OMIM607742   
Gene and transcription
Genbank (Entrez)AK000268 BC111964 BC111968
RefSeq transcript (Entrez)NM_019016
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KRT24
Cluster EST : UnigeneHs.87383 [ NCBI ]
CGAP (NCI)Hs.87383
Alternative Splicing GalleryENSG00000167916
Gene ExpressionKRT24 [ NCBI-GEO ]   KRT24 [ EBI - ARRAY_EXPRESS ]   KRT24 [ SEEK ]   KRT24 [ MEM ]
Gene Expression Viewer (FireBrowse)KRT24 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)192666
GTEX Portal (Tissue expression)KRT24
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2M2I5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2M2I5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2M2I5
Splice isoforms : SwissVarQ2M2I5
PhosPhoSitePlusQ2M2I5
Domaine pattern : Prosite (Expaxy)IF (PS00226)   
Domains : Interpro (EBI)IF    Intermediate_filament_CS    Keratin_I    Prefoldin   
Domain families : Pfam (Sanger)Filament (PF00038)   
Domain families : Pfam (NCBI)pfam00038   
Domain families : Smart (EMBL)Filament (SM01391)  
Conserved Domain (NCBI)KRT24
DMDM Disease mutations192666
Blocks (Seattle)KRT24
SuperfamilyQ2M2I5
Human Protein AtlasENSG00000167916
Peptide AtlasQ2M2I5
HPRD09668
IPIIPI00004550   
Protein Interaction databases
DIP (DOE-UCLA)Q2M2I5
IntAct (EBI)Q2M2I5
FunCoupENSG00000167916
BioGRIDKRT24
STRING (EMBL)KRT24
ZODIACKRT24
Ontologies - Pathways
QuickGOQ2M2I5
Ontology : AmiGOmolecular_function  structural molecule activity  cytosol  intermediate filament  biological_process  keratinization  extracellular exosome  cornification  
Ontology : EGO-EBImolecular_function  structural molecule activity  cytosol  intermediate filament  biological_process  keratinization  extracellular exosome  cornification  
NDEx NetworkKRT24
Atlas of Cancer Signalling NetworkKRT24
Wikipedia pathwaysKRT24
Orthology - Evolution
OrthoDB192666
GeneTree (enSembl)ENSG00000167916
Phylogenetic Trees/Animal Genes : TreeFamKRT24
HOVERGENQ2M2I5
HOGENOMQ2M2I5
Homologs : HomoloGeneKRT24
Homology/Alignments : Family Browser (UCSC)KRT24
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKRT24 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KRT24
dbVarKRT24
ClinVarKRT24
1000_GenomesKRT24 
Exome Variant ServerKRT24
ExAC (Exome Aggregation Consortium)KRT24 (select the gene name)
Genetic variants : HAPMAP192666
Genomic Variants (DGV)KRT24 [DGVbeta]
DECIPHERKRT24 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKRT24 
Mutations
ICGC Data PortalKRT24 
TCGA Data PortalKRT24 
Broad Tumor PortalKRT24
OASIS PortalKRT24 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKRT24  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKRT24
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KRT24
DgiDB (Drug Gene Interaction Database)KRT24
DoCM (Curated mutations)KRT24 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KRT24 (select a term)
intoGenKRT24
Cancer3DKRT24(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607742   
Orphanet
MedgenKRT24
Genetic Testing Registry KRT24
NextProtQ2M2I5 [Medical]
TSGene192666
GENETestsKRT24
Target ValidationKRT24
Huge Navigator KRT24 [HugePedia]
snp3D : Map Gene to Disease192666
BioCentury BCIQKRT24
ClinGenKRT24
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD192666
Chemical/Pharm GKB GenePA38344
Clinical trialKRT24
Miscellaneous
canSAR (ICR)KRT24 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRT24
EVEXKRT24
GoPubMedKRT24
iHOPKRT24
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:12:08 CEST 2017

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