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KRT26 (keratin 26)

Identity

Alias_namesKRT25B
keratin 25B
keratin 26, type I
Other aliasCK26
K25
K25IRS2
K26
HGNC (Hugo) KRT26
LocusID (NCBI) 353288
Atlas_Id 65019
Location 17q21.2  [Link to chromosome band 17q21]
Location_base_pair Starts at 40766238 and ends at 40772159 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRT26   30840
Cards
Entrez_Gene (NCBI)KRT26  353288  keratin 26
AliasesCK26; K25; K25IRS2; K26; 
KRT25B
GeneCards (Weizmann)KRT26
Ensembl hg19 (Hinxton)ENSG00000186393 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186393 [Gene_View]  chr17:40766238-40772159 [Contig_View]  KRT26 [Vega]
ICGC DataPortalENSG00000186393
TCGA cBioPortalKRT26
AceView (NCBI)KRT26
Genatlas (Paris)KRT26
WikiGenes353288
SOURCE (Princeton)KRT26
Genetics Home Reference (NIH)KRT26
Genomic and cartography
GoldenPath hg38 (UCSC)KRT26  -     chr17:40766238-40772159 -  17q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KRT26  -     17q21.2   [Description]    (hg19-Feb_2009)
EnsemblKRT26 - 17q21.2 [CytoView hg19]  KRT26 - 17q21.2 [CytoView hg38]
Mapping of homologs : NCBIKRT26 [Mapview hg19]  KRT26 [Mapview hg38]
OMIM616675   
Gene and transcription
Genbank (Entrez)AJ564205 BC132951 BC136896
RefSeq transcript (Entrez)NM_181539
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KRT26
Cluster EST : UnigeneHs.592133 [ NCBI ]
CGAP (NCI)Hs.592133
Alternative Splicing GalleryENSG00000186393
Gene ExpressionKRT26 [ NCBI-GEO ]   KRT26 [ EBI - ARRAY_EXPRESS ]   KRT26 [ SEEK ]   KRT26 [ MEM ]
Gene Expression Viewer (FireBrowse)KRT26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)353288
GTEX Portal (Tissue expression)KRT26
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z3Y9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z3Y9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z3Y9
Splice isoforms : SwissVarQ7Z3Y9
PhosPhoSitePlusQ7Z3Y9
Domains : Interpro (EBI)IF    Keratin_I   
Domain families : Pfam (Sanger)Filament (PF00038)   
Domain families : Pfam (NCBI)pfam00038   
Domain families : Smart (EMBL)Filament (SM01391)  
Conserved Domain (NCBI)KRT26
DMDM Disease mutations353288
Blocks (Seattle)KRT26
SuperfamilyQ7Z3Y9
Human Protein AtlasENSG00000186393
Peptide AtlasQ7Z3Y9
HPRD17243
IPIIPI00375910   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z3Y9
IntAct (EBI)Q7Z3Y9
FunCoupENSG00000186393
BioGRIDKRT26
STRING (EMBL)KRT26
ZODIACKRT26
Ontologies - Pathways
QuickGOQ7Z3Y9
Ontology : AmiGOstructural molecule activity  cytosol  intermediate filament  keratinization  extracellular exosome  cornification  
Ontology : EGO-EBIstructural molecule activity  cytosol  intermediate filament  keratinization  extracellular exosome  cornification  
NDEx NetworkKRT26
Atlas of Cancer Signalling NetworkKRT26
Wikipedia pathwaysKRT26
Orthology - Evolution
OrthoDB353288
GeneTree (enSembl)ENSG00000186393
Phylogenetic Trees/Animal Genes : TreeFamKRT26
HOVERGENQ7Z3Y9
HOGENOMQ7Z3Y9
Homologs : HomoloGeneKRT26
Homology/Alignments : Family Browser (UCSC)KRT26
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKRT26 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KRT26
dbVarKRT26
ClinVarKRT26
1000_GenomesKRT26 
Exome Variant ServerKRT26
ExAC (Exome Aggregation Consortium)KRT26 (select the gene name)
Genetic variants : HAPMAP353288
Genomic Variants (DGV)KRT26 [DGVbeta]
DECIPHERKRT26 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKRT26 
Mutations
ICGC Data PortalKRT26 
TCGA Data PortalKRT26 
Broad Tumor PortalKRT26
OASIS PortalKRT26 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKRT26  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKRT26
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KRT26
DgiDB (Drug Gene Interaction Database)KRT26
DoCM (Curated mutations)KRT26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KRT26 (select a term)
intoGenKRT26
Cancer3DKRT26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616675   
Orphanet
MedgenKRT26
Genetic Testing Registry KRT26
NextProtQ7Z3Y9 [Medical]
TSGene353288
GENETestsKRT26
Huge Navigator KRT26 [HugePedia]
snp3D : Map Gene to Disease353288
BioCentury BCIQKRT26
ClinGenKRT26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD353288
Chemical/Pharm GKB GenePA134863261
Clinical trialKRT26
Miscellaneous
canSAR (ICR)KRT26 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRT26
EVEXKRT26
GoPubMedKRT26
iHOPKRT26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:18:27 CEST 2017

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