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KRT37 (keratin 37)

Identity

Alias_namesKRTHA7
keratin, hair, acidic, 7
keratin 37, type I
Other aliasHA7
K37
HGNC (Hugo) KRT37
LocusID (NCBI) 8688
Atlas_Id 65029
Location 17q21.2  [Link to chromosome band 17q21]
Location_base_pair Starts at 41420557 and ends at 41424570 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRT37   6455
Cards
Entrez_Gene (NCBI)KRT37  8688  keratin 37
AliasesHA7; K37; KRTHA7
GeneCards (Weizmann)KRT37
Ensembl hg19 (Hinxton)ENSG00000108417 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000108417 [Gene_View]  chr17:41420557-41424570 [Contig_View]  KRT37 [Vega]
ICGC DataPortalENSG00000108417
TCGA cBioPortalKRT37
AceView (NCBI)KRT37
Genatlas (Paris)KRT37
WikiGenes8688
SOURCE (Princeton)KRT37
Genetics Home Reference (NIH)KRT37
Genomic and cartography
GoldenPath hg38 (UCSC)KRT37  -     chr17:41420557-41424570 -  17q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KRT37  -     17q21.2   [Description]    (hg19-Feb_2009)
EnsemblKRT37 - 17q21.2 [CytoView hg19]  KRT37 - 17q21.2 [CytoView hg38]
Mapping of homologs : NCBIKRT37 [Mapview hg19]  KRT37 [Mapview hg38]
OMIM604541   
Gene and transcription
Genbank (Entrez)AJ786655 BC140319
RefSeq transcript (Entrez)NM_003770
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KRT37
Cluster EST : UnigeneHs.673852 [ NCBI ]
CGAP (NCI)Hs.673852
Alternative Splicing GalleryENSG00000108417
Gene ExpressionKRT37 [ NCBI-GEO ]   KRT37 [ EBI - ARRAY_EXPRESS ]   KRT37 [ SEEK ]   KRT37 [ MEM ]
Gene Expression Viewer (FireBrowse)KRT37 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8688
GTEX Portal (Tissue expression)KRT37
Human Protein AtlasENSG00000108417-KRT37 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO76014   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO76014  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO76014
Splice isoforms : SwissVarO76014
PhosPhoSitePlusO76014
Domaine pattern : Prosite (Expaxy)IF (PS00226)   
Domains : Interpro (EBI)IF    Intermediate_filament_CS    Keratin_I   
Domain families : Pfam (Sanger)Filament (PF00038)   
Domain families : Pfam (NCBI)pfam00038   
Domain families : Smart (EMBL)Filament (SM01391)  
Conserved Domain (NCBI)KRT37
DMDM Disease mutations8688
Blocks (Seattle)KRT37
SuperfamilyO76014
Human Protein Atlas [tissue]ENSG00000108417-KRT37 [tissue]
Peptide AtlasO76014
HPRD05175
IPIIPI00329240   IPI00446330   
Protein Interaction databases
DIP (DOE-UCLA)O76014
IntAct (EBI)O76014
FunCoupENSG00000108417
BioGRIDKRT37
STRING (EMBL)KRT37
ZODIACKRT37
Ontologies - Pathways
QuickGOO76014
Ontology : AmiGOstructural molecule activity  cytosol  intermediate filament  keratinization  extracellular exosome  cornification  
Ontology : EGO-EBIstructural molecule activity  cytosol  intermediate filament  keratinization  extracellular exosome  cornification  
NDEx NetworkKRT37
Atlas of Cancer Signalling NetworkKRT37
Wikipedia pathwaysKRT37
Orthology - Evolution
OrthoDB8688
GeneTree (enSembl)ENSG00000108417
Phylogenetic Trees/Animal Genes : TreeFamKRT37
HOVERGENO76014
HOGENOMO76014
Homologs : HomoloGeneKRT37
Homology/Alignments : Family Browser (UCSC)KRT37
Gene fusions - Rearrangements
Fusion: Tumor Portal KRT37
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKRT37 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KRT37
dbVarKRT37
ClinVarKRT37
1000_GenomesKRT37 
Exome Variant ServerKRT37
ExAC (Exome Aggregation Consortium)ENSG00000108417
GNOMAD BrowserENSG00000108417
Genetic variants : HAPMAP8688
Genomic Variants (DGV)KRT37 [DGVbeta]
DECIPHERKRT37 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKRT37 
Mutations
ICGC Data PortalKRT37 
TCGA Data PortalKRT37 
Broad Tumor PortalKRT37
OASIS PortalKRT37 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKRT37  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKRT37
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KRT37
DgiDB (Drug Gene Interaction Database)KRT37
DoCM (Curated mutations)KRT37 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KRT37 (select a term)
intoGenKRT37
Cancer3DKRT37(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604541   
Orphanet
MedgenKRT37
Genetic Testing Registry KRT37
NextProtO76014 [Medical]
TSGene8688
GENETestsKRT37
Target ValidationKRT37
Huge Navigator KRT37 [HugePedia]
snp3D : Map Gene to Disease8688
BioCentury BCIQKRT37
ClinGenKRT37
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8688
Chemical/Pharm GKB GenePA30244
Clinical trialKRT37
Miscellaneous
canSAR (ICR)KRT37 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRT37
EVEXKRT37
GoPubMedKRT37
iHOPKRT37
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:52:53 CET 2017

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