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KRT42P (keratin 42 pseudogene)

Identity

Other alias-
HGNC (Hugo) KRT42P
LocusID (NCBI) 284116
Atlas_Id 65033
Location 17q21.2  [Link to chromosome band 17q21]
Location_base_pair Starts at 39782579 and ends at 39796451 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRT42P   27581
Cards
Entrez_Gene (NCBI)KRT42P  284116  keratin 42 pseudogene
Aliases
GeneCards (Weizmann)KRT42P
Ensembl hg19 (Hinxton)ENSG00000214514 [Gene_View]  chr17:39782579-39796451 [Contig_View]  KRT42P [Vega]
Ensembl hg38 (Hinxton)ENSG00000214514 [Gene_View]  chr17:39782579-39796451 [Contig_View]  KRT42P [Vega]
ICGC DataPortalENSG00000214514
TCGA cBioPortalKRT42P
AceView (NCBI)KRT42P
Genatlas (Paris)KRT42P
WikiGenes284116
SOURCE (Princeton)KRT42P
Genetics Home Reference (NIH)KRT42P
Genomic and cartography
GoldenPath hg19 (UCSC)KRT42P  -     chr17:39782579-39796451 -  17q21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KRT42P  -     17q21.2   [Description]    (hg38-Dec_2013)
EnsemblKRT42P - 17q21.2 [CytoView hg19]  KRT42P - 17q21.2 [CytoView hg38]
Mapping of homologs : NCBIKRT42P [Mapview hg19]  KRT42P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095281 AK125965
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000017 NC_018928 NG_006516 NG_009090 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)KRT42P
Cluster EST : UnigeneHs.725790 [ NCBI ]
CGAP (NCI)Hs.725790
Alternative Splicing GalleryENSG00000214514
Gene ExpressionKRT42P [ NCBI-GEO ]   KRT42P [ EBI - ARRAY_EXPRESS ]   KRT42P [ SEEK ]   KRT42P [ MEM ]
Gene Expression Viewer (FireBrowse)KRT42P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284116
GTEX Portal (Tissue expression)KRT42P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KRT42P
DMDM Disease mutations284116
Blocks (Seattle)KRT42P
Human Protein AtlasENSG00000214514
IPIIPI00445358   
Protein Interaction databases
FunCoupENSG00000214514
BioGRIDKRT42P
STRING (EMBL)KRT42P
ZODIACKRT42P
Ontologies - Pathways
Huge Navigator KRT42P [HugePedia]
snp3D : Map Gene to Disease284116
BioCentury BCIQKRT42P
ClinGenKRT42P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284116
Chemical/Pharm GKB GenePA147357675
Clinical trialKRT42P
Miscellaneous
canSAR (ICR)KRT42P (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRT42P
EVEXKRT42P
GoPubMedKRT42P
iHOPKRT42P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:10:15 CET 2017

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