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KRT75 (keratin 75)

Identity

Alias_nameskeratin 75
Alias_symbol (synonym)K6HF
Other aliasKB18
PFB
HGNC (Hugo) KRT75
LocusID (NCBI) 9119
Atlas_Id 50917
Location 12q13.13  [Link to chromosome band 12q13]
Location_base_pair Starts at 52424070 and ends at 52434326 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRT75   24431
Cards
Entrez_Gene (NCBI)KRT75  9119  keratin 75
AliasesK6HF; KB18; PFB
GeneCards (Weizmann)KRT75
Ensembl hg19 (Hinxton)ENSG00000170454 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170454 [Gene_View]  ENSG00000170454 [Sequence]  chr12:52424070-52434326 [Contig_View]  KRT75 [Vega]
ICGC DataPortalENSG00000170454
TCGA cBioPortalKRT75
AceView (NCBI)KRT75
Genatlas (Paris)KRT75
WikiGenes9119
SOURCE (Princeton)KRT75
Genetics Home Reference (NIH)KRT75
Genomic and cartography
GoldenPath hg38 (UCSC)KRT75  -     chr12:52424070-52434326 -  12q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KRT75  -     12q13.13   [Description]    (hg19-Feb_2009)
EnsemblKRT75 - 12q13.13 [CytoView hg19]  KRT75 - 12q13.13 [CytoView hg38]
Mapping of homologs : NCBIKRT75 [Mapview hg19]  KRT75 [Mapview hg38]
OMIM609025   612318   
Gene and transcription
Genbank (Entrez)AK225962 AK298960 Y17282
RefSeq transcript (Entrez)NM_004693
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KRT75
Cluster EST : UnigeneHs.697046 [ NCBI ]
CGAP (NCI)Hs.697046
Alternative Splicing GalleryENSG00000170454
Gene ExpressionKRT75 [ NCBI-GEO ]   KRT75 [ EBI - ARRAY_EXPRESS ]   KRT75 [ SEEK ]   KRT75 [ MEM ]
Gene Expression Viewer (FireBrowse)KRT75 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9119
GTEX Portal (Tissue expression)KRT75
Human Protein AtlasENSG00000170454-KRT75 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95678   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95678  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95678
Splice isoforms : SwissVarO95678
PhosPhoSitePlusO95678
Domaine pattern : Prosite (Expaxy)IF_ROD_1 (PS00226)    IF_ROD_2 (PS51842)   
Domains : Interpro (EBI)IF    Intermediate_filament_CS    Keratin_2_head    Keratin_II   
Domain families : Pfam (Sanger)Filament (PF00038)    Keratin_2_head (PF16208)   
Domain families : Pfam (NCBI)pfam00038    pfam16208   
Domain families : Smart (EMBL)Filament (SM01391)  
Conserved Domain (NCBI)KRT75
DMDM Disease mutations9119
Blocks (Seattle)KRT75
SuperfamilyO95678
Human Protein Atlas [tissue]ENSG00000170454-KRT75 [tissue]
Peptide AtlasO95678
HPRD11057
IPIIPI00005859   
Protein Interaction databases
DIP (DOE-UCLA)O95678
IntAct (EBI)O95678
FunCoupENSG00000170454
BioGRIDKRT75
STRING (EMBL)KRT75
ZODIACKRT75
Ontologies - Pathways
QuickGOO95678
Ontology : AmiGOhematopoietic progenitor cell differentiation  structural molecule activity  cytosol  intermediate filament  keratinization  keratin filament  extracellular exosome  cornification  
Ontology : EGO-EBIhematopoietic progenitor cell differentiation  structural molecule activity  cytosol  intermediate filament  keratinization  keratin filament  extracellular exosome  cornification  
NDEx NetworkKRT75
Atlas of Cancer Signalling NetworkKRT75
Wikipedia pathwaysKRT75
Orthology - Evolution
OrthoDB9119
GeneTree (enSembl)ENSG00000170454
Phylogenetic Trees/Animal Genes : TreeFamKRT75
HOVERGENO95678
HOGENOMO95678
Homologs : HomoloGeneKRT75
Homology/Alignments : Family Browser (UCSC)KRT75
Gene fusions - Rearrangements
Fusion : QuiverKRT75
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKRT75 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KRT75
dbVarKRT75
ClinVarKRT75
1000_GenomesKRT75 
Exome Variant ServerKRT75
ExAC (Exome Aggregation Consortium)ENSG00000170454
GNOMAD BrowserENSG00000170454
Varsome BrowserKRT75
Genetic variants : HAPMAP9119
Genomic Variants (DGV)KRT75 [DGVbeta]
DECIPHERKRT75 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKRT75 
Mutations
ICGC Data PortalKRT75 
TCGA Data PortalKRT75 
Broad Tumor PortalKRT75
OASIS PortalKRT75 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKRT75  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKRT75
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KRT75
DgiDB (Drug Gene Interaction Database)KRT75
DoCM (Curated mutations)KRT75 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KRT75 (select a term)
intoGenKRT75
Cancer3DKRT75(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609025    612318   
Orphanet
DisGeNETKRT75
MedgenKRT75
Genetic Testing Registry KRT75
NextProtO95678 [Medical]
TSGene9119
GENETestsKRT75
Target ValidationKRT75
Huge Navigator KRT75 [HugePedia]
snp3D : Map Gene to Disease9119
BioCentury BCIQKRT75
ClinGenKRT75
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9119
Chemical/Pharm GKB GenePA147357763
Clinical trialKRT75
Miscellaneous
canSAR (ICR)KRT75 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRT75
EVEXKRT75
GoPubMedKRT75
iHOPKRT75
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Aug 27 11:31:16 CEST 2018

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