Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KRT76 (keratin 76, type II)

Identity

Alias_nameskeratin 76, type II
Alias_symbol (synonym)HUMCYT2A
KRT2B
KRT2P
Other alias
HGNC (Hugo) KRT76
LocusID (NCBI) 51350
Atlas_Id 65040
Location 12q13.13  [Link to chromosome band 12q13]
Location_base_pair Starts at 53161939 and ends at 53171129 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRT76   24430
Cards
Entrez_Gene (NCBI)KRT76  51350  keratin 76, type II
AliasesHUMCYT2A; KRT2B; KRT2P
GeneCards (Weizmann)KRT76
Ensembl hg19 (Hinxton)ENSG00000185069 [Gene_View]  chr12:53161939-53171129 [Contig_View]  KRT76 [Vega]
Ensembl hg38 (Hinxton)ENSG00000185069 [Gene_View]  chr12:53161939-53171129 [Contig_View]  KRT76 [Vega]
ICGC DataPortalENSG00000185069
TCGA cBioPortalKRT76
AceView (NCBI)KRT76
Genatlas (Paris)KRT76
WikiGenes51350
SOURCE (Princeton)KRT76
Genetics Home Reference (NIH)KRT76
Genomic and cartography
GoldenPath hg19 (UCSC)KRT76  -     chr12:53161939-53171129 -  12q13.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KRT76  -     12q13.13   [Description]    (hg38-Dec_2013)
EnsemblKRT76 - 12q13.13 [CytoView hg19]  KRT76 - 12q13.13 [CytoView hg38]
Mapping of homologs : NCBIKRT76 [Mapview hg19]  KRT76 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK299390 BC167839 M99063
RefSeq transcript (Entrez)NM_015848
RefSeq genomic (Entrez)NC_000012 NC_018923 NG_012420 NT_029419 NW_004929384
Consensus coding sequences : CCDS (NCBI)KRT76
Cluster EST : UnigeneHs.654392 [ NCBI ]
CGAP (NCI)Hs.654392
Alternative Splicing GalleryENSG00000185069
Gene ExpressionKRT76 [ NCBI-GEO ]   KRT76 [ EBI - ARRAY_EXPRESS ]   KRT76 [ SEEK ]   KRT76 [ MEM ]
Gene Expression Viewer (FireBrowse)KRT76 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51350
GTEX Portal (Tissue expression)KRT76
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ01546   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ01546  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ01546
Splice isoforms : SwissVarQ01546
PhosPhoSitePlusQ01546
Domaine pattern : Prosite (Expaxy)IF (PS00226)   
Domains : Interpro (EBI)IF    Intermediate_filament_CS    Keratin_II   
Domain families : Pfam (Sanger)Filament (PF00038)   
Domain families : Pfam (NCBI)pfam00038   
Conserved Domain (NCBI)KRT76
DMDM Disease mutations51350
Blocks (Seattle)KRT76
SuperfamilyQ01546
Human Protein AtlasENSG00000185069
Peptide AtlasQ01546
HPRD17123
IPIIPI00008359   
Protein Interaction databases
DIP (DOE-UCLA)Q01546
IntAct (EBI)Q01546
FunCoupENSG00000185069
BioGRIDKRT76
STRING (EMBL)KRT76
ZODIACKRT76
Ontologies - Pathways
QuickGOQ01546
Ontology : AmiGOstructural molecule activity  nucleus  intermediate filament  cytoskeleton organization  keratin filament  extracellular exosome  
Ontology : EGO-EBIstructural molecule activity  nucleus  intermediate filament  cytoskeleton organization  keratin filament  extracellular exosome  
NDEx NetworkKRT76
Atlas of Cancer Signalling NetworkKRT76
Wikipedia pathwaysKRT76
Orthology - Evolution
OrthoDB51350
GeneTree (enSembl)ENSG00000185069
Phylogenetic Trees/Animal Genes : TreeFamKRT76
HOVERGENQ01546
HOGENOMQ01546
Homologs : HomoloGeneKRT76
Homology/Alignments : Family Browser (UCSC)KRT76
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKRT76 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KRT76
dbVarKRT76
ClinVarKRT76
1000_GenomesKRT76 
Exome Variant ServerKRT76
ExAC (Exome Aggregation Consortium)KRT76 (select the gene name)
Genetic variants : HAPMAP51350
Genomic Variants (DGV)KRT76 [DGVbeta]
DECIPHER (Syndromes)12:53161939-53171129  ENSG00000185069
CONAN: Copy Number AnalysisKRT76 
Mutations
ICGC Data PortalKRT76 
TCGA Data PortalKRT76 
Broad Tumor PortalKRT76
OASIS PortalKRT76 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKRT76  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKRT76
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KRT76
DgiDB (Drug Gene Interaction Database)KRT76
DoCM (Curated mutations)KRT76 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KRT76 (select a term)
intoGenKRT76
Cancer3DKRT76(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKRT76
Genetic Testing Registry KRT76
NextProtQ01546 [Medical]
TSGene51350
GENETestsKRT76
Huge Navigator KRT76 [HugePedia]
snp3D : Map Gene to Disease51350
BioCentury BCIQKRT76
ClinGenKRT76
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51350
Chemical/Pharm GKB GenePA147357785
Clinical trialKRT76
Miscellaneous
canSAR (ICR)KRT76 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRT76
EVEXKRT76
GoPubMedKRT76
iHOPKRT76
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:10:16 CET 2017

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