Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

KRT81 (keratin 81)

Identity

Other namesHB1
Hb-1
KRTHB1
MLN137
ghHkb1
hHAKB2-1
HGNC (Hugo) KRT81
LocusID (NCBI) 3887
Location 12q13.13
Location_base_pair Starts at 52679697 and ends at 52685299 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)KRT81   6458
Cards
Entrez_Gene (NCBI)KRT81  3887  keratin 81
GeneCards (Weizmann)KRT81
Ensembl (Hinxton)ENSG00000205426 [Gene_View]  chr12:52679697-52685299 [Contig_View]  KRT81 [Vega]
ICGC DataPortalENSG00000205426
cBioPortalKRT81
AceView (NCBI)KRT81
Genatlas (Paris)KRT81
WikiGenes3887
SOURCE (Princeton)NM_002281
Genomic and cartography
GoldenPath (UCSC)KRT81  -  12q13.13   chr12:52679697-52685299 -  12q13.13   [Description]    (hg19-Feb_2009)
EnsemblKRT81 - 12q13.13 [CytoView]
Mapping of homologs : NCBIKRT81 [Mapview]
OMIM158000   602153   
Gene and transcription
Genbank (Entrez)BC006452 BC021241 BC031978 BC117465 BC117467
RefSeq transcript (Entrez)NM_002281
RefSeq genomic (Entrez)AC_000144 NC_000012 NC_018923 NG_008184 NT_029419 NW_001838057 NW_004929384
Consensus coding sequences : CCDS (NCBI)KRT81
Cluster EST : UnigeneHs.658118 [ NCBI ]
CGAP (NCI)Hs.658118
Alternative Splicing : Fast-db (Paris)GSHG0007477
Alternative Splicing GalleryENSG00000205426
Gene ExpressionKRT81 [ NCBI-GEO ]     KRT81 [ SEEK ]   KRT81 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14533 (Uniprot)
NextProtQ14533  [Medical]
With graphics : InterProQ14533
Splice isoforms : SwissVarQ14533 (Swissvar)
Domaine pattern : Prosite (Expaxy)IF (PS00226)   
Domains : Interpro (EBI)IF [organisation]   Intermediate_filament_CS [organisation]   Keratin_II [organisation]  
Related proteins : CluSTrQ14533
Domain families : Pfam (Sanger)Filament (PF00038)   
Domain families : Pfam (NCBI)pfam00038   
DMDM Disease mutations3887
Blocks (Seattle)Q14533
Human Protein AtlasENSG00000205426 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ14533
HPRD03691
IPIIPI00760863   IPI00871418   IPI01019025   IPI01019117   IPI01019024   
Protein Interaction databases
DIP (DOE-UCLA)Q14533
IntAct (EBI)Q14533
FunCoupENSG00000205426
BioGRIDKRT81
InParanoidQ14533
Interologous Interaction database Q14533
IntegromeDBKRT81
STRING (EMBL)KRT81
Ontologies - Pathways
Ontology : AmiGOstructural molecule activity  protein binding  extracellular space  keratin filament  
Ontology : EGO-EBIstructural molecule activity  protein binding  extracellular space  keratin filament  
Protein Interaction DatabaseKRT81
Wikipedia pathwaysKRT81
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)KRT81
snp3D : Map Gene to Disease3887
SNP (GeneSNP Utah)KRT81
SNP : HGBaseKRT81
Genetic variants : HAPMAPKRT81
Exome VariantKRT81
1000_GenomesKRT81 
ICGC programENSG00000205426 
Somatic Mutations in Cancer : COSMICKRT81 
CONAN: Copy Number AnalysisKRT81 
Mutations and Diseases : HGMDKRT81
Mutations and Diseases : intOGenKRT81
Genomic VariantsKRT81  KRT81 [DGVbeta]
dbVarKRT81
ClinVarKRT81
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM158000    602153   
MedgenKRT81
GENETestsKRT81
Disease Genetic AssociationKRT81
Huge Navigator KRT81 [HugePedia]  KRT81 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneKRT81
Homology/Alignments : Family Browser (UCSC)KRT81
Phylogenetic Trees/Animal Genes : TreeFamKRT81
Chemical/Protein Interactions : CTD3887
Chemical/Pharm GKB GenePA30247
Clinical trialKRT81
Cancer Resource (Charite)ENSG00000205426
Other databases
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
CoreMineKRT81
iHOPKRT81
OncoSearchKRT81
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 26 16:52:18 CEST 2014

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.