Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KRT8P41 (keratin 8 pseudogene 41)

Identity

Other alias-
HGNC (Hugo) KRT8P41
LocusID (NCBI) 283102
Atlas_Id 65049
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 9094363 and ends at 9096190 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRT8P41   39875
Cards
Entrez_Gene (NCBI)KRT8P41  283102  keratin 8 pseudogene 41
Aliases
GeneCards (Weizmann)KRT8P41
Ensembl hg19 (Hinxton)ENSG00000213538 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213538 [Gene_View]  chr11:9094363-9096190 [Contig_View]  KRT8P41 [Vega]
ICGC DataPortalENSG00000213538
TCGA cBioPortalKRT8P41
AceView (NCBI)KRT8P41
Genatlas (Paris)KRT8P41
WikiGenes283102
SOURCE (Princeton)KRT8P41
Genetics Home Reference (NIH)KRT8P41
Genomic and cartography
GoldenPath hg38 (UCSC)KRT8P41  -     chr11:9094363-9096190 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KRT8P41  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblKRT8P41 - 11p15.4 [CytoView hg19]  KRT8P41 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIKRT8P41 [Mapview hg19]  KRT8P41 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK127993 BC093663 BC112006
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KRT8P41
Cluster EST : UnigeneHs.689472 [ NCBI ]
CGAP (NCI)Hs.689472
Alternative Splicing GalleryENSG00000213538
Gene ExpressionKRT8P41 [ NCBI-GEO ]   KRT8P41 [ EBI - ARRAY_EXPRESS ]   KRT8P41 [ SEEK ]   KRT8P41 [ MEM ]
Gene Expression Viewer (FireBrowse)KRT8P41 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)283102
GTEX Portal (Tissue expression)KRT8P41
Human Protein AtlasENSG00000213538-KRT8P41 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KRT8P41
DMDM Disease mutations283102
Blocks (Seattle)KRT8P41
Human Protein Atlas [tissue]ENSG00000213538-KRT8P41 [tissue]
IPIIPI00396004   
Protein Interaction databases
FunCoupENSG00000213538
BioGRIDKRT8P41
STRING (EMBL)KRT8P41
ZODIACKRT8P41
Ontologies - Pathways
Huge Navigator KRT8P41 [HugePedia]
snp3D : Map Gene to Disease283102
BioCentury BCIQKRT8P41
ClinGenKRT8P41
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283102
Clinical trialKRT8P41
Miscellaneous
canSAR (ICR)KRT8P41 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRT8P41
EVEXKRT8P41
GoPubMedKRT8P41
iHOPKRT8P41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:52:57 CET 2017

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