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KRTAP10-5 (keratin associated protein 10-5)

Identity

Alias_namesKRTAP18-5
Alias_symbol (synonym)KAP10.5
KAP18.5
Other aliasKAP18-5
KRTAP10.5
KRTAP18.1
KRTAP18.5
HGNC (Hugo) KRTAP10-5
LocusID (NCBI) 386680
Atlas_Id 65057
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 44579455 and ends at 44580604 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRTAP10-5   22969
Cards
Entrez_Gene (NCBI)KRTAP10-5  386680  keratin associated protein 10-5
AliasesKAP10.5; KAP18-5; KAP18.5; KRTAP10.5; 
KRTAP18-5; KRTAP18.1; KRTAP18.5
GeneCards (Weizmann)KRTAP10-5
Ensembl hg19 (Hinxton)ENSG00000241123 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241123 [Gene_View]  chr21:44579455-44580604 [Contig_View]  KRTAP10-5 [Vega]
ICGC DataPortalENSG00000241123
TCGA cBioPortalKRTAP10-5
AceView (NCBI)KRTAP10-5
Genatlas (Paris)KRTAP10-5
WikiGenes386680
SOURCE (Princeton)KRTAP10-5
Genetics Home Reference (NIH)KRTAP10-5
Genomic and cartography
GoldenPath hg38 (UCSC)KRTAP10-5  -     chr21:44579455-44580604 -  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KRTAP10-5  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblKRTAP10-5 - 21q22.3 [CytoView hg19]  KRTAP10-5 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBIKRTAP10-5 [Mapview hg19]  KRTAP10-5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB076352 AJ566384 BC120949 BC120950
RefSeq transcript (Entrez)NM_198694
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KRTAP10-5
Cluster EST : UnigeneHs.688629 [ NCBI ]
CGAP (NCI)Hs.688629
Alternative Splicing GalleryENSG00000241123
Gene ExpressionKRTAP10-5 [ NCBI-GEO ]   KRTAP10-5 [ EBI - ARRAY_EXPRESS ]   KRTAP10-5 [ SEEK ]   KRTAP10-5 [ MEM ]
Gene Expression Viewer (FireBrowse)KRTAP10-5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)386680
GTEX Portal (Tissue expression)KRTAP10-5
Protein : pattern, domain, 3D structure
UniProt/SwissProtP60370   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP60370  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP60370
Splice isoforms : SwissVarP60370
PhosPhoSitePlusP60370
Domains : Interpro (EBI)KAP   
Domain families : Pfam (Sanger)Keratin_B2_2 (PF13885)   
Domain families : Pfam (NCBI)pfam13885   
Conserved Domain (NCBI)KRTAP10-5
DMDM Disease mutations386680
Blocks (Seattle)KRTAP10-5
SuperfamilyP60370
Human Protein AtlasENSG00000241123
Peptide AtlasP60370
HPRD11191
IPIIPI00394675   
Protein Interaction databases
DIP (DOE-UCLA)P60370
IntAct (EBI)P60370
FunCoupENSG00000241123
BioGRIDKRTAP10-5
STRING (EMBL)KRTAP10-5
ZODIACKRTAP10-5
Ontologies - Pathways
QuickGOP60370
Ontology : AmiGOprotein binding  cytosol  keratinization  identical protein binding  keratin filament  
Ontology : EGO-EBIprotein binding  cytosol  keratinization  identical protein binding  keratin filament  
NDEx NetworkKRTAP10-5
Atlas of Cancer Signalling NetworkKRTAP10-5
Wikipedia pathwaysKRTAP10-5
Orthology - Evolution
OrthoDB386680
GeneTree (enSembl)ENSG00000241123
Phylogenetic Trees/Animal Genes : TreeFamKRTAP10-5
HOVERGENP60370
HOGENOMP60370
Homologs : HomoloGeneKRTAP10-5
Homology/Alignments : Family Browser (UCSC)KRTAP10-5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKRTAP10-5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KRTAP10-5
dbVarKRTAP10-5
ClinVarKRTAP10-5
1000_GenomesKRTAP10-5 
Exome Variant ServerKRTAP10-5
ExAC (Exome Aggregation Consortium)KRTAP10-5 (select the gene name)
Genetic variants : HAPMAP386680
Genomic Variants (DGV)KRTAP10-5 [DGVbeta]
DECIPHERKRTAP10-5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKRTAP10-5 
Mutations
ICGC Data PortalKRTAP10-5 
TCGA Data PortalKRTAP10-5 
Broad Tumor PortalKRTAP10-5
OASIS PortalKRTAP10-5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKRTAP10-5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKRTAP10-5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KRTAP10-5
DgiDB (Drug Gene Interaction Database)KRTAP10-5
DoCM (Curated mutations)KRTAP10-5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KRTAP10-5 (select a term)
intoGenKRTAP10-5
Cancer3DKRTAP10-5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKRTAP10-5
Genetic Testing Registry KRTAP10-5
NextProtP60370 [Medical]
TSGene386680
GENETestsKRTAP10-5
Huge Navigator KRTAP10-5 [HugePedia]
snp3D : Map Gene to Disease386680
BioCentury BCIQKRTAP10-5
ClinGenKRTAP10-5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD386680
Chemical/Pharm GKB GenePA134950015
Clinical trialKRTAP10-5
Miscellaneous
canSAR (ICR)KRTAP10-5 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRTAP10-5
EVEXKRTAP10-5
GoPubMedKRTAP10-5
iHOPKRTAP10-5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:18:37 CEST 2017

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