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KRTAP10-8 (keratin associated protein 10-8)

Identity

Alias_namesKRTAP18-8
keratin associated protein 18-8
Alias_symbol (synonym)KRTAP18.8
KAP10.8
Other alias
HGNC (Hugo) KRTAP10-8
LocusID (NCBI) 386681
Atlas_Id 65060
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 46031996 and ends at 46032871 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRTAP10-8   20525
Cards
Entrez_Gene (NCBI)KRTAP10-8  386681  keratin associated protein 10-8
AliasesKAP10.8; KRTAP18-8; KRTAP18.8
GeneCards (Weizmann)KRTAP10-8
Ensembl hg19 (Hinxton)ENSG00000187766 [Gene_View]  chr21:46031996-46032871 [Contig_View]  KRTAP10-8 [Vega]
Ensembl hg38 (Hinxton)ENSG00000187766 [Gene_View]  chr21:46031996-46032871 [Contig_View]  KRTAP10-8 [Vega]
ICGC DataPortalENSG00000187766
TCGA cBioPortalKRTAP10-8
AceView (NCBI)KRTAP10-8
Genatlas (Paris)KRTAP10-8
WikiGenes386681
SOURCE (Princeton)KRTAP10-8
Genetics Home Reference (NIH)KRTAP10-8
Genomic and cartography
GoldenPath hg19 (UCSC)KRTAP10-8  -     chr21:46031996-46032871 +  21q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KRTAP10-8  -     21q22.3   [Description]    (hg38-Dec_2013)
EnsemblKRTAP10-8 - 21q22.3 [CytoView hg19]  KRTAP10-8 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBIKRTAP10-8 [Mapview hg19]  KRTAP10-8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB076355 BC127016
RefSeq transcript (Entrez)NM_198695
RefSeq genomic (Entrez)NC_000021 NC_018932 NG_033806 NT_011512 NW_004929427
Consensus coding sequences : CCDS (NCBI)KRTAP10-8
Cluster EST : UnigeneHs.528021 [ NCBI ]
CGAP (NCI)Hs.528021
Alternative Splicing GalleryENSG00000187766
Gene ExpressionKRTAP10-8 [ NCBI-GEO ]   KRTAP10-8 [ EBI - ARRAY_EXPRESS ]   KRTAP10-8 [ SEEK ]   KRTAP10-8 [ MEM ]
Gene Expression Viewer (FireBrowse)KRTAP10-8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)386681
GTEX Portal (Tissue expression)KRTAP10-8
Protein : pattern, domain, 3D structure
UniProt/SwissProtP60410   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP60410  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP60410
Splice isoforms : SwissVarP60410
PhosPhoSitePlusP60410
Domains : Interpro (EBI)KAP    KRTAP_PMG   
Domain families : Pfam (Sanger)Keratin_B2_2 (PF13885)    PMG (PF05287)   
Domain families : Pfam (NCBI)pfam13885    pfam05287   
Conserved Domain (NCBI)KRTAP10-8
DMDM Disease mutations386681
Blocks (Seattle)KRTAP10-8
SuperfamilyP60410
Human Protein AtlasENSG00000187766
Peptide AtlasP60410
HPRD11194
IPIIPI00394677   
Protein Interaction databases
DIP (DOE-UCLA)P60410
IntAct (EBI)P60410
FunCoupENSG00000187766
BioGRIDKRTAP10-8
STRING (EMBL)KRTAP10-8
ZODIACKRTAP10-8
Ontologies - Pathways
QuickGOP60410
Ontology : AmiGOprotein binding  keratin filament  
Ontology : EGO-EBIprotein binding  keratin filament  
NDEx NetworkKRTAP10-8
Atlas of Cancer Signalling NetworkKRTAP10-8
Wikipedia pathwaysKRTAP10-8
Orthology - Evolution
OrthoDB386681
GeneTree (enSembl)ENSG00000187766
Phylogenetic Trees/Animal Genes : TreeFamKRTAP10-8
HOVERGENP60410
HOGENOMP60410
Homologs : HomoloGeneKRTAP10-8
Homology/Alignments : Family Browser (UCSC)KRTAP10-8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKRTAP10-8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KRTAP10-8
dbVarKRTAP10-8
ClinVarKRTAP10-8
1000_GenomesKRTAP10-8 
Exome Variant ServerKRTAP10-8
ExAC (Exome Aggregation Consortium)KRTAP10-8 (select the gene name)
Genetic variants : HAPMAP386681
Genomic Variants (DGV)KRTAP10-8 [DGVbeta]
DECIPHER (Syndromes)21:46031996-46032871  ENSG00000187766
CONAN: Copy Number AnalysisKRTAP10-8 
Mutations
ICGC Data PortalKRTAP10-8 
TCGA Data PortalKRTAP10-8 
Broad Tumor PortalKRTAP10-8
OASIS PortalKRTAP10-8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKRTAP10-8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKRTAP10-8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KRTAP10-8
DgiDB (Drug Gene Interaction Database)KRTAP10-8
DoCM (Curated mutations)KRTAP10-8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KRTAP10-8 (select a term)
intoGenKRTAP10-8
Cancer3DKRTAP10-8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKRTAP10-8
Genetic Testing Registry KRTAP10-8
NextProtP60410 [Medical]
TSGene386681
GENETestsKRTAP10-8
Huge Navigator KRTAP10-8 [HugePedia]
snp3D : Map Gene to Disease386681
BioCentury BCIQKRTAP10-8
ClinGenKRTAP10-8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD386681
Chemical/Pharm GKB GenePA134968895
Clinical trialKRTAP10-8
Miscellaneous
canSAR (ICR)KRTAP10-8 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRTAP10-8
EVEXKRTAP10-8
GoPubMedKRTAP10-8
iHOPKRTAP10-8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:10:21 CET 2017

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