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KRTAP19-1 (keratin associated protein 19-1)

Identity

Alias_symbol (synonym)KAP19.1
Other alias
HGNC (Hugo) KRTAP19-1
LocusID (NCBI) 337882
Atlas_Id 65078
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 30480045 and ends at 30480317 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRTAP19-1   18936
Cards
Entrez_Gene (NCBI)KRTAP19-1  337882  keratin associated protein 19-1
AliasesKAP19.1
GeneCards (Weizmann)KRTAP19-1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:30480045-30480317 [Contig_View]  KRTAP19-1 [Vega]
TCGA cBioPortalKRTAP19-1
AceView (NCBI)KRTAP19-1
Genatlas (Paris)KRTAP19-1
WikiGenes337882
SOURCE (Princeton)KRTAP19-1
Genetics Home Reference (NIH)KRTAP19-1
Genomic and cartography
GoldenPath hg38 (UCSC)KRTAP19-1  -     chr21:30480045-30480317 -  21q22.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KRTAP19-1  -     21q22.11   [Description]    (hg19-Feb_2009)
EnsemblKRTAP19-1 - 21q22.11 [CytoView hg19]  KRTAP19-1 - 21q22.11 [CytoView hg38]
Mapping of homologs : NCBIKRTAP19-1 [Mapview hg19]  KRTAP19-1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB096943 AJ457067 BC126284 BC126286 BC146600
RefSeq transcript (Entrez)NM_181607
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KRTAP19-1
Cluster EST : UnigeneHs.61552 [ NCBI ]
CGAP (NCI)Hs.61552
Gene ExpressionKRTAP19-1 [ NCBI-GEO ]   KRTAP19-1 [ EBI - ARRAY_EXPRESS ]   KRTAP19-1 [ SEEK ]   KRTAP19-1 [ MEM ]
Gene Expression Viewer (FireBrowse)KRTAP19-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)337882
GTEX Portal (Tissue expression)KRTAP19-1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IUB9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IUB9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IUB9
Splice isoforms : SwissVarQ8IUB9
PhosPhoSitePlusQ8IUB9
Domains : Interpro (EBI)KRTAP_type6/8/16/19/20/21   
Domain families : Pfam (Sanger)KRTAP (PF11759)   
Domain families : Pfam (NCBI)pfam11759   
Conserved Domain (NCBI)KRTAP19-1
DMDM Disease mutations337882
Blocks (Seattle)KRTAP19-1
SuperfamilyQ8IUB9
Peptide AtlasQ8IUB9
HPRD11205
IPIIPI00328110   IPI00941224   
Protein Interaction databases
DIP (DOE-UCLA)Q8IUB9
IntAct (EBI)Q8IUB9
BioGRIDKRTAP19-1
STRING (EMBL)KRTAP19-1
ZODIACKRTAP19-1
Ontologies - Pathways
QuickGOQ8IUB9
Ontology : AmiGOcytosol  intermediate filament  keratinization  
Ontology : EGO-EBIcytosol  intermediate filament  keratinization  
NDEx NetworkKRTAP19-1
Atlas of Cancer Signalling NetworkKRTAP19-1
Wikipedia pathwaysKRTAP19-1
Orthology - Evolution
OrthoDB337882
Phylogenetic Trees/Animal Genes : TreeFamKRTAP19-1
HOVERGENQ8IUB9
HOGENOMQ8IUB9
Homologs : HomoloGeneKRTAP19-1
Homology/Alignments : Family Browser (UCSC)KRTAP19-1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKRTAP19-1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KRTAP19-1
dbVarKRTAP19-1
ClinVarKRTAP19-1
1000_GenomesKRTAP19-1 
Exome Variant ServerKRTAP19-1
ExAC (Exome Aggregation Consortium)KRTAP19-1 (select the gene name)
Genetic variants : HAPMAP337882
Genomic Variants (DGV)KRTAP19-1 [DGVbeta]
DECIPHERKRTAP19-1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKRTAP19-1 
Mutations
ICGC Data PortalKRTAP19-1 
TCGA Data PortalKRTAP19-1 
Broad Tumor PortalKRTAP19-1
OASIS PortalKRTAP19-1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKRTAP19-1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKRTAP19-1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KRTAP19-1
DgiDB (Drug Gene Interaction Database)KRTAP19-1
DoCM (Curated mutations)KRTAP19-1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KRTAP19-1 (select a term)
intoGenKRTAP19-1
Cancer3DKRTAP19-1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKRTAP19-1
Genetic Testing Registry KRTAP19-1
NextProtQ8IUB9 [Medical]
TSGene337882
GENETestsKRTAP19-1
Target ValidationKRTAP19-1
Huge Navigator KRTAP19-1 [HugePedia]
snp3D : Map Gene to Disease337882
BioCentury BCIQKRTAP19-1
ClinGenKRTAP19-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD337882
Chemical/Pharm GKB GenePA134956142
Clinical trialKRTAP19-1
Miscellaneous
canSAR (ICR)KRTAP19-1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRTAP19-1
EVEXKRTAP19-1
GoPubMedKRTAP19-1
iHOPKRTAP19-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:55:11 CEST 2017

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